Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2077 ATGACAAACTGTTCCGATTCTGAGATTCAGATTCTGCAGGTGAAGGGGATTGAGCTTAGATTGCAATTGATGAACGATGATCGTGAATTCTCCAACAACTCTCAGTCCAATCCTCCTCCCTTTCGGAAGATCAAATCAAGACTGTTTTCAGGGGCAAAGTGCGTGGCAAAGTTTTTCCTGATTCCATGGTTTGCTGTTAAACTTGCACTTGGATTCCCCCTTGTGACTATAATCTTGATACAAAAATGGAGAAAAGGAAATTCAGCTGAATACGATGAGGTTGAAGAATTTCTTCAAAGTCACAATTACATGATGCCCATAAGATACTCCTACTCAGATGTGAAAAAGATGACCAATGGTTTTAAGCACAAGTTAGGTGAAGGTGGTTATGGTTCAGTCTACAAGGGAAGACTTCGAAGCAGAGAGTATGTAGCCGTGAAGTTATTGACAAAGCTCAAAACCAATGGACATGAATTCATCAGTGAAGTTTCCACCATTGGAAGTATTCATCACGCTAATGTGGTCCGTCTAATTGGATTTTGTGCCGAAAGAACAAAGAAAGCACTTGTCTATGAGTTCATGTCCAATGGCTCTCTTGACAGATACATACTTGAAAAACAAGGAGACTTAATGCTTGATTATCAGAAGATGTATGAGATTTCCTTAGGAGCAGCACGTGGAATTGAATATTTGCATCGAGGTTGCCATATGCAAATTTTACATTTTGACATCAAACCTCACAACATTCTACTTGATGACAATTTTGTTCCAAAAATTTCAGACTTTGGGATGGCAAGAATGTGTCCACTAGATAAAAGTATTCTATCACTATCCACAGTTGGAGGAACACTAGGATACATGGCTCCTGAATTGTTGTACAAAAATATTGGAGGTATCTCACACAAAGCAGATGTTTACAGTTTCGGGATGATGATGATGGAAATGGCAGGAAGAAGAAAGAACCATAATGTGGTGGAGAATTCTTGGCAAACTTATTTTGCCAAATGGGTTCATGACCAGTTTGAGGAATCAATACTGAAGAGCAATGCCTCAAATGAAGACAAGAAAATCGCAATAAAAATGATTGCTATAGCATTGAATTGTATTGAGATGAGGCCATGTGATCGTCCATCGATGAGCAAAGTAATTGACATGCTTCAAGGACATGTTGAGCCAGAAAACATTCTACCATATATATGA 1200 0.3875 MTNCSDSEIQILQVKGIELRLQLMNDDREFSNNSQSNPPPFRKIKSRLFSGAKCVAKFFLIPWFAVKLALGFPLVTIILIQKWRKGNSAEYDEVEEFLQSHNYMMPIRYSYSDVKKMTNGFKHKLGEGGYGSVYKGRLRSREYVAVKLLTKLKTNGHEFISEVSTIGSIHHANVVRLIGFCAERTKKALVYEFMSNGSLDRYILEKQGDLMLDYQKMYEISLGAARGIEYLHRGCHMQILHFDIKPHNILLDDNFVPKISDFGMARMCPLDKSILSLSTVGGTLGYMAPELLYKNIGGISHKADVYSFGMMMMEMAGRRKNHNVVENSWQTYFAKWVHDQFEESILKSNASNEDKKIAIKMIAIALNCIEMRPCDRPSMSKVIDMLQGHVEPENILPYI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2077 399 SUPERFAMILY Protein kinase-like (PK-like) 99 386 IPR011009 -
Prci11g2077 399 PANTHER RUST RESISTANCE KINASE LR10-RELATED 91 390 IPR045874 GO:0004672
Prci11g2077 399 FunFam PR5-like receptor kinase 194 396 - -
Prci11g2077 399 FunFam serine/threonine-protein kinase PBS1-like 87 193 - -
Prci11g2077 399 ProSitePatterns Protein kinases ATP-binding region signature. 125 147 IPR017441 GO:0005524
Prci11g2077 399 SMART serkin_6 119 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2077 399 ProSiteProfiles Protein kinase domain profile. 119 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2077 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Prci11g2077 399 Gene3D Transferase(Phosphotransferase) domain 1 194 395 - -
Prci11g2077 399 Pfam Protein kinase domain 122 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2077 399 Gene3D Phosphorylase Kinase; domain 1 91 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2077 Prci-Chr11 18516697 18521023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2077 108 397 Receptor kinase-like Gene Family AT5G38280 49.164 9.32e-97 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci11g2077 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2077 - - tpra:123914142 453.751