Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2076 ATGACAAACTGTTCCGATTCTGAGATTCAGATTCTGCAGGTGAAGGGGATTGAGCTTAGATTGCAATTGATGAACGATGATCGTGAATTCTCCAACAACTCTCAGTCCAATCCTCCTCCCTTTCGGAAGATCAAATCAAGACTGTTTTCAGTGATTCCATGGTTTGCTGTTAAACTTGCACTTGGATTCCCCCTTGTGACTATAATCTTGATACAAAAATGGAGAAAAGGAAATTCAGCTGAATACGATGAGGTTGAAGAATTTCTTCAAAGTCACAATTACATGATGCCCATAAGATACTCCTACTCAGATGTGAAAAAGATGACCAATGGTTTTAAGCACAAGTTAGGTGAAGGTGGTTATGGTTCAGTCTACAAGGGAAGACTTCGAAGCAGAGAGTATGTAGCCGTGAAGTTATTGACAAAGCTCAAAACCAATGGACATGAATTCATCAGTGAAGTTTCCACCATTGGAAGTATTCATCACGCTAATGTGGTCCGTCTAATTGGATTTTGTGCCGAAAGAACAAAGAAAGCACTTGTCTATGAGTTCATGTCCAATGGCTCTCTTGACAGATACATACTTGAAAAACAAGGAGACTTAATGCTTGATTATCAGAAGATGTATGAGATTTCCTTAGGAGCAGCACGTGGAATTGAATATTTGCATCGAGGTTGCCATATGCAAATTTTACATTTTGACATCAAACCTCACAACATTCTACTTGATGACAATTTTGTTCCAAAAATTTCAGACTTTGGGATGGCAAGAATGTGTCCACTAGATAAAAGTATTCTATCACTATCCACAGTTGGAGGAACACTAGGATACATGGCTCCTGAATTGTTGTACAAAAATATTGGAGGTATCTCACACAAAGCAGATGTTTACAGTTTCGGGATGATGATGATGGAAATGGCAGGAAGAAGAAAGAACCATAATGTGGTGGAGAATTCTTGGCAAACTTATTTTGCCAAATGGGTTCATGACCAGTTTGAGGAATCAATACTGAAGAGCAATGCCTCAAATGAAGACAAGAAAATCGCAATAAAAATGATTGCTATAGCATTGAATTGTATTGAGATGAGGCCATGTGATCGTCCATCGATGAGCAAAGTAATTGACATGCTTCAAGGACATGTTGAGCCAGAAAACATTCTACCATATATATGA 1173 0.3845 MTNCSDSEIQILQVKGIELRLQLMNDDREFSNNSQSNPPPFRKIKSRLFSVIPWFAVKLALGFPLVTIILIQKWRKGNSAEYDEVEEFLQSHNYMMPIRYSYSDVKKMTNGFKHKLGEGGYGSVYKGRLRSREYVAVKLLTKLKTNGHEFISEVSTIGSIHHANVVRLIGFCAERTKKALVYEFMSNGSLDRYILEKQGDLMLDYQKMYEISLGAARGIEYLHRGCHMQILHFDIKPHNILLDDNFVPKISDFGMARMCPLDKSILSLSTVGGTLGYMAPELLYKNIGGISHKADVYSFGMMMMEMAGRRKNHNVVENSWQTYFAKWVHDQFEESILKSNASNEDKKIAIKMIAIALNCIEMRPCDRPSMSKVIDMLQGHVEPENILPYI 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2076 390 FunFam PR5-like receptor kinase 185 387 - -
Prci11g2076 390 ProSiteProfiles Protein kinase domain profile. 110 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2076 390 SUPERFAMILY Protein kinase-like (PK-like) 90 377 IPR011009 -
Prci11g2076 390 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
Prci11g2076 390 Gene3D Phosphorylase Kinase; domain 1 82 184 - -
Prci11g2076 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Prci11g2076 390 FunFam serine/threonine-protein kinase PBS1-like 78 184 - -
Prci11g2076 390 Pfam Protein kinase domain 113 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2076 390 SMART serkin_6 110 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2076 390 PANTHER RUST RESISTANCE KINASE LR10-RELATED 82 381 IPR045874 GO:0004672
Prci11g2076 390 Gene3D Transferase(Phosphotransferase) domain 1 185 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2076 Prci-Chr11 18516697 18521024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2076 99 388 Receptor kinase-like Gene Family AT5G38280 49.164 7.18e-97 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci11g2076 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2076 - - tpra:123914142 453.366