Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2075 ATGGTTCTTTGTCGTTTTTATGATTTAGATCCTCTTCCTCAAGTGCTTGAAAGTAATCACGATCACGATTTGACTAGTGGCGCTGTTTATACAGTGGTTTTGTGGTCTGTGGCTAAATTTGTACTGGGTGCCCCCTGTGCTTTTATATTCTTGATTTGTCGATGGAGAAGAAGGCATCAATCTTATGACGACAATGTTGAGGACTTCCTCCAAAATAATAGTAACCTGATGCCCATCAAATACTCTTACTCAGAGATCAAGAGAATGACCAACGGCTTCAAACACAAGTTAGGTGAAGGAGGCTATGGTTATGTCTATAAAGGTAAGCTTCGAAGCAATCGCGATGTAGCTGTCAAGTTACTGGGAAAGTCCAAAGCCAGTGATGCACAAGATTTCATCAGCGAAGTTGCCACTATAGGTAGGATTCATCATGTCAATGTGGTGCAGCTGATTGGATTCTGTGCTGAAAGAAATAAGCGAGCTCTTGTTTATGAGTTTATGTCTAATGGGTCTCTTGACAATTACATATTCTCGGAGAAACAAGGGAACGTGTCCATCATCTTTGAGAAAATATTTAATATTTCTCTCGGGATTGCTCGAGGAATTGACTATTTACATCAAGGATGTGACATGCAAATTCTACACTTTGATATCAAACCTCACAATATCCTTCTTGATGAGAACTTTAATCCAAAAGTTTCAGATTTTGGATTGGCAAAATTGTATCCATTAGATAATAGTATTATATCTCTAACAAATGCAAGGGGAACATTGGATACATGGCGCCTGAATTTTTTGTACAAGAACATTGGAGGAATATCACCCAAAGCTGATGTTTATAGTTTTGGGATGTTGCTGATGGAAATGGCAGGGAGAAGAAAGAACATGAATGTCATTGAACATTCTTGGCAAACATATTTTGCCAAATGGGTCTATGACCAGTTTGAGGAATCAATAGATGAGGGTAATTCCAGTAATGAGGAAAGGAAAATTGCAAAGAAGATGATTACTGTAGCTTCACATTGCATACAGATGTACCCTAGTGATCGACCCTCAATGAAGAAAGTGATAGACATGCTTGTAGGAGAAACTGAACTCCAAGAAGCTCTACCACCCTAA 1119 0.3878 MVLCRFYDLDPLPQVLESNHDHDLTSGAVYTVVLWSVAKFVLGAPCAFIFLICRWRRRHQSYDDNVEDFLQNNSNLMPIKYSYSEIKRMTNGFKHKLGEGGYGYVYKGKLRSNRDVAVKLLGKSKASDAQDFISEVATIGRIHHVNVVQLIGFCAERNKRALVYEFMSNGSLDNYIFSEKQGNVSIIFEKIFNISLGIARGIDYLHQGCDMQILHFDIKPHNILLDENFNPKVSDFGLAKLYPLDNSIISLTNARGTLDTWRLNFLYKNIGGISPKADVYSFGMLLMEMAGRRKNMNVIEHSWQTYFAKWVYDQFEESIDEGNSSNEERKIAKKMITVASHCIQMYPSDRPSMKKVIDMLVGETELQEALPP 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2075 372 Gene3D Transferase(Phosphotransferase) domain 1 167 369 - -
Prci11g2075 372 Gene3D Phosphorylase Kinase; domain 1 64 166 - -
Prci11g2075 372 Pfam Protein kinase domain 94 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2075 372 SMART serkin_6 91 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2075 372 FunFam serine/threonine-protein kinase PBS1-like 59 166 - -
Prci11g2075 372 SUPERFAMILY Protein kinase-like (PK-like) 68 360 IPR011009 -
Prci11g2075 372 ProSitePatterns Protein kinases ATP-binding region signature. 97 119 IPR017441 GO:0005524
Prci11g2075 372 PANTHER RUST RESISTANCE KINASE LR10-RELATED 60 367 IPR045874 GO:0004672
Prci11g2075 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Prci11g2075 372 FunFam Os07g0541700 protein 167 257 - -
Prci11g2075 372 ProSiteProfiles Protein kinase domain profile. 91 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2075 Prci-Chr11 18446227 18464494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2075 57 371 Receptor kinase-like Gene Family AT5G38280 48.457 4.66e-93 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci11g2075 Pkinase 7.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2075 - - tpra:123914142 455.677