Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2074 ATGGTTCTTTGTCGTTTTTATGATTTAGATCCTCTTCCTCAAGTGCTTGAAAATTTGACTAGTGGCGCTGTTTATACAGTGGTTTTGTGGTCTGTGGCTAAATTTGTACTGGGTGCCCCCTGTGCTTTTATATTCTTGATTTGTCGATGGAGAAGAAGGCATCAATCTTATGACGACAATGTTGAGGACTTCCTCCAAAATAATAGTAACCTGATGCCCATCAAATACTCTTACTCAGAGATCAAGAGAATGACCAACGGCTTCAAACACAAGTTAGGTGAAGGAGGCTATGGTTATGTCTATAAAGGTAAGCTTCGAAGCAATCGCGATGTAGCTGTCAAGTTACTGGGAAAGTCCAAAGCCAGTGATGCACAAGATTTCATCAGCGAAGTTGCCACTATAGGTAGGATTCATCATGTCAATGTGGTGCAGCTGATTGGATTCTGTGCTGAAAGAAATAAGCGAGCTCTTGTTTATGAGTTTATGTCTAATGGGTCTCTTGACAATTACATATTCTCGGAGAAACAAGGGAACGTGTCCATCATCTTTGAGAAAATATTTAATATTTCTCTCGGGATTGCTCGAGGAATTGACTATTTACATCAAGGATGTGACATGCAAATTCTACACTTTGATATCAAACCTCACAATATCCTTCTTGATGAGAACTTTAATCCAAAAGTTTCAGATTTTGGATTGGCAAAATTGTATCCATTAGATAATAGTATTATATCTCTAACAAATGCAAGGGGAACATTGGATACATGGCGCCTGAATTTTTTGTACAAGAACATTGGAGGAATATCACCCAAAGCTGATGTTTATAGTTTTGGGATGTTGCTGATGGAAATGGCAGGGAGAAGAAAGAACATGAATGTCATTGAACATTCTTGGCAAACATATTTTGCCAAATGGGTCTATGACCAGTTTGAGGAATCAATAGATGAGGGTAATTCCAGTAATGAGGAAAGGAAAATTGCAAAGAAGATGATTACTGTAGCTTCACATTGCATACAGATGTACCCTAGTGATCGACCCTCAATGAAGAAAGTGATAGACATGCTTGTAGGAGAAACTGAACTCCAAGAAGCTCTACCACCCTAA 1104 0.3868 MVLCRFYDLDPLPQVLENLTSGAVYTVVLWSVAKFVLGAPCAFIFLICRWRRRHQSYDDNVEDFLQNNSNLMPIKYSYSEIKRMTNGFKHKLGEGGYGYVYKGKLRSNRDVAVKLLGKSKASDAQDFISEVATIGRIHHVNVVQLIGFCAERNKRALVYEFMSNGSLDNYIFSEKQGNVSIIFEKIFNISLGIARGIDYLHQGCDMQILHFDIKPHNILLDENFNPKVSDFGLAKLYPLDNSIISLTNARGTLDTWRLNFLYKNIGGISPKADVYSFGMLLMEMAGRRKNMNVIEHSWQTYFAKWVYDQFEESIDEGNSSNEERKIAKKMITVASHCIQMYPSDRPSMKKVIDMLVGETELQEALPP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2074 367 FunFam serine/threonine-protein kinase PBS1-like 54 161 - -
Prci11g2074 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Prci11g2074 367 Pfam Protein kinase domain 89 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2074 367 Gene3D Phosphorylase Kinase; domain 1 59 161 - -
Prci11g2074 367 PANTHER RUST RESISTANCE KINASE LR10-RELATED 55 362 IPR045874 GO:0004672
Prci11g2074 367 ProSiteProfiles Protein kinase domain profile. 86 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2074 367 ProSitePatterns Protein kinases ATP-binding region signature. 92 114 IPR017441 GO:0005524
Prci11g2074 367 SMART serkin_6 86 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2074 367 Gene3D Transferase(Phosphotransferase) domain 1 162 364 - -
Prci11g2074 367 SUPERFAMILY Protein kinase-like (PK-like) 63 355 IPR011009 -
Prci11g2074 367 FunFam Os07g0541700 protein 162 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2074 Prci-Chr11 18446227 18464494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2074 52 366 Receptor kinase-like Gene Family AT5G38280 48.457 4.06e-93 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci11g2074 Pkinase 7.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2074 - - tpra:123914142 455.677