Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2072 ATGTCGGAGAATGATGGGCCCATCAAGGAAGATGAAAATATTTGGATGGTCGTCTCCTATGTTGGGTCTCTGGCTGTTTCTCACTTTATCCTTTGGTCTGCAGCAAAATTTGTTCTGGGATTCCCCATTGCCGTTGGGTTTCTAATATATAAAATCAGAAGGAGGCATTTATCTGAGTATGACGACATTGAAGACTTCCTACGAAGTCACAGCAATTTAGTGCCCATCAAATACTCTTACTCTGACATAAAAAGGATAACAAAAAATTTCAAACATAAGTTAGGAGAAGGAGGCTATGGTTCTGTATATAAAGGAAAGCTTCAAAGCAAGCGTGGAGTGGCTGTTAAGCTATTAGGAAAGTCAACAACTGATGGACATGATTTCATCAATGAAGTTGCCACCATTGGAACTATTCGTCATTTAAATGTGGTGCAATTGATAGGATTTTGTGCAGAGAGAAGAAAGCAAGCTCTTGTCTATGAGTTCATGCCAAATGGATCTCTTGATAAATACATACTTTCTGAGCATGGAAAATTATCAATAAATTGTGAGAAAATTAATGATATTTCTTTAGGGGTGGCTCGTGGAATTGAATACCTGCATAAAGGTTGTGACAAGCAAATCCTAAACTTTGATATCAAGCCTCACAACATTCTTCTTGATGAGAATTTTGCTCCCAAGATCTCAGACTTTGGATTGGCAAAATTAGATCCAGCAGATAAAAGTATTGTGTCTCTAACTGCAGCTAGAGGCACAATGGGATACATGGCTCCTGAATTGTTATATAAAAACATTGGAGGCATCTCACACAAGGCCGATGTTTATAGTTTTGGGATGATGTTGATGGAAATGGCAGGAAGAAGAAAGAACTATGATATTGTGCAGAATTCTTGGCAGACTTACTTTGCAAAATGGGTTCATGATCAGTTCGAAGAAACAATACTTAAAAACAATGCCACAGAAGAAGAGAAGAAGATAGCACAGAAATTGATTACCGTGGCTTTTAGTTGCATTCAGCTGAGCCCAAGTGATCGCCCCTCAATGAGCAGAGTAGTAGAGATGCTTCAAGGAGATGTTGAAGCATCAGAGATTCTGCCACCAGAACCTTCAGAGGATAGTGCAAGAGACAGTTCAATTTGA 1140 0.3895 MSENDGPIKEDENIWMVVSYVGSLAVSHFILWSAAKFVLGFPIAVGFLIYKIRRRHLSEYDDIEDFLRSHSNLVPIKYSYSDIKRITKNFKHKLGEGGYGSVYKGKLQSKRGVAVKLLGKSTTDGHDFINEVATIGTIRHLNVVQLIGFCAERRKQALVYEFMPNGSLDKYILSEHGKLSINCEKINDISLGVARGIEYLHKGCDKQILNFDIKPHNILLDENFAPKISDFGLAKLDPADKSIVSLTAARGTMGYMAPELLYKNIGGISHKADVYSFGMMLMEMAGRRKNYDIVQNSWQTYFAKWVHDQFEETILKNNATEEEKKIAQKLITVAFSCIQLSPSDRPSMSRVVEMLQGDVEASEILPPEPSEDSARDSSI 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2072 379 SUPERFAMILY Protein kinase-like (PK-like) 69 355 IPR011009 -
Prci11g2072 379 FunFam serine/threonine-protein kinase PBS1-like 58 162 - -
Prci11g2072 379 SMART serkin_6 88 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2072 379 MobiDBLite consensus disorder prediction 359 379 - -
Prci11g2072 379 FunFam PR5-like receptor kinase 163 366 - -
Prci11g2072 379 Pfam Protein kinase domain 91 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2072 379 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Prci11g2072 379 ProSiteProfiles Protein kinase domain profile. 88 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2072 379 PANTHER RUST RESISTANCE KINASE LR10-RELATED 60 371 IPR045874 GO:0004672
Prci11g2072 379 Gene3D Phosphorylase Kinase; domain 1 53 162 - -
Prci11g2072 379 Gene3D Transferase(Phosphotransferase) domain 1 163 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2072 Prci-Chr11 18430919 18439284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2072 77 369 Receptor kinase-like Gene Family AT5G38280 51.656 3.27e-104 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci11g2072 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2072 - - tpra:123914142 479.174