Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2071 ATGTTGGCTGTCGATGTGGTGGCTGAACCTGTTCTCCATGATCCATGCATACAATCAAGGTGTAGTGTTTATGGACCAGAGATTCGATTCCCCTTTAGACTCAAAGGAAAACAGCCAGAAGCGTGTGGCTATGGTTCTGGCTTTGATGTATACTGTACTGAAACAAACAAGACAGTGCTCGAGCTGCCTTCCTCTGTCAAGGTTTTCGTCCAAGGCATAGACTATAAATCACAGTTCTTAACTGTATCTGATCCTGATGGATGCCTTGCTCATCTCACTTTATATGCGTCTCCTTTTCGGTCAACTTACAATTATGGATCAGGTGGATATGCATTATTCAACTGTTCAGGGACGTCTCGTAGAAATTCAGAATTTCGACAATGGGGGGACTTTTCTTGCGTCGATGTTCCTGGCTATGAAGTTTTAGCTATACCGTACACAGAGAGAATCATGGACAACCCTCTGTTATCATGCATGAGAATTCCTAGTTACACATCAGTGCCTGAGTCATTTATTTACAGTGACCATACAATAAGTCTATCTTGGCCCAAACCGGATTGCAGAAACTGTGAAGAAAATGGAGGGCAGTGTAAATTGAGAGAAGACAAAGTTGAACGTGAACCTGAATGTATCAAAAGCCCTCGTAAAGGTCCACCAAAAAAGATAGAACTTGCTGGTGAAATCCTAGGCCCGTTTCTGCTCATATTTGTTGGAGTTATTATTTATTGGGTCTATGCAGCTAGCCTCGAGAGGCAAGGTTACAAGAAAATTAGGCAGTTTTTGGAGGATTACAAAGCACTGAGGCCAGCTCGGTACTCCTATGCAGATATAAAGCGAATCACAAATCAATTCAAGGATGAACTTGGACAAGGAGCTTATGGAACTGTCTATGAAGGGAAGCTATCTAATGAAATTCTGGTTGCTGTTAAGCTGCTAAACACTTCAACAGGGAATGGACGAGAGTTCATCAATGAAATGGAAACAATGTGTCAAATTCACCATGTCAATGTTGCTCGCTTGGTTGGCTACTGTGCAGATGGATTCAAACGAGCTCTGGTTTATGAATTCTTACCTAATGGTTCATTGCAGAAATTCATAACTTCAGCTGACAGAAAGGACCTTTTTCTGGGTTGGGCAAAGCTTCATGATATTGCTCTTGGCATAGCCAAAGGAATTGAGTATCTTCATGAAGATTGTGACAAACGAATTCTTCACTTTGATATCAAACCACACAACATTCTTCTAGATGATAAGTTCACGCCTAAAATATCTGATTTTGGTTTGGCCAAACTGTGTTCGAAGGATCAAAGCATTGTGTCAATGACAACAGCTAGGGGAACTTTGGGCTACATTGCACCAGAGATATTTTCTCGAAATTTTGGCAATGTATCCTATAAATCAGATGTTTATAGTTATGGAATGTTGCTTCTTGAAATGGTTGGAGGGAGAAAAATCACAGATGTCACAGCAGAAAATACCGAACAAGTTTACTACCCACAATGGATTTACAATCTTCTAGAGAACAATGAAGACATACAAATCCATATAGAGGAAGAGGAGGACACTAAAATTGCAAGAAAACTATCTATTATCGGACTTTGGTGCATTCAATGGCATCCAGCAAATCGTCCAACCATGAAAAATGTGGTTCAAATGTTGGAAGGAGATGATGAAAAGCTAATTTTGCCTCCTAATCCTTTTGGGTCTGCACATGCAACCAGAACAAGCATTGTTAATGGAGCAAGGAGATTGAAACCAGAGTTATCTGTCATTTCTGAAATAGAGTGA 1788 0.4044 MLAVDVVAEPVLHDPCIQSRCSVYGPEIRFPFRLKGKQPEACGYGSGFDVYCTETNKTVLELPSSVKVFVQGIDYKSQFLTVSDPDGCLAHLTLYASPFRSTYNYGSGGYALFNCSGTSRRNSEFRQWGDFSCVDVPGYEVLAIPYTERIMDNPLLSCMRIPSYTSVPESFIYSDHTISLSWPKPDCRNCEENGGQCKLREDKVEREPECIKSPRKGPPKKIELAGEILGPFLLIFVGVIIYWVYAASLERQGYKKIRQFLEDYKALRPARYSYADIKRITNQFKDELGQGAYGTVYEGKLSNEILVAVKLLNTSTGNGREFINEMETMCQIHHVNVARLVGYCADGFKRALVYEFLPNGSLQKFITSADRKDLFLGWAKLHDIALGIAKGIEYLHEDCDKRILHFDIKPHNILLDDKFTPKISDFGLAKLCSKDQSIVSMTTARGTLGYIAPEIFSRNFGNVSYKSDVYSYGMLLLEMVGGRKITDVTAENTEQVYYPQWIYNLLENNEDIQIHIEEEEDTKIARKLSIIGLWCIQWHPANRPTMKNVVQMLEGDDEKLILPPNPFGSAHATRTSIVNGARRLKPELSVISEIE 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2071 595 FunFam serine/threonine-protein kinase PBS1-like 251 356 - -
Prci11g2071 595 Pfam Protein kinase domain 285 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2071 595 ProSiteProfiles Protein kinase domain profile. 282 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2071 595 Gene3D Phosphorylase Kinase; domain 1 257 356 - -
Prci11g2071 595 FunFam PR5-like receptor kinase 357 564 - -
Prci11g2071 595 Gene3D Transferase(Phosphotransferase) domain 1 357 561 - -
Prci11g2071 595 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Prci11g2071 595 PANTHER RUST RESISTANCE KINASE LR10-RELATED 254 571 IPR045874 GO:0004672
Prci11g2071 595 SUPERFAMILY Protein kinase-like (PK-like) 267 554 IPR011009 -
Prci11g2071 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Prci11g2071 595 SMART serkin_6 282 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2071 595 Pfam Wall-associated receptor kinase galacturonan-binding 18 84 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2071 Prci-Chr11 18430369 18442868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2071 30 594 Receptor kinase-like Gene Family AT1G66910 36.699 1.86e-109 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci11g2071 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2071 - - tpra:123914140 786.178