Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2053 ATGGCGGATTTACAAGATGGGCTCACGCCGCCGGCGACCAATCACCGGCCGATGCCGGTCCGGGAAGATTGTTGGAGCGAGGAGGCTACTTCCACCCTCGTGGACGCCTGGGGCCGGCGATTCCTGGAGCTGAACAAAGGGAATCTTCGGCAGAAGGACTGGCAGGACGTGGCGGATGCCGTGAACGCTCTACATGGTCTTACGAAGAAAACCCACCGTACTGATGTCCAGTGTAAGAATCGCATCGATACTATTAAGAAGAAGTATAAGGTTGAGAAGGCTAGGGTTGTGAGCTCCAATGGGAATGTTTCCTCCTCTTGGCCGTTTTTTGAACGGTTGGATGCTTTGATTGGGTCCAATTATAATTCGAAAAAGTCGTCCCCGTCGCCACCGGTGGCTCTCCCGTTGCCGTATCGTAAGACCCAGTCCCCGCCGGTGACTGCTGTGCCAGCATCTGTGGCACTGCCGCAGAAGCGGTCAGCTGTGCCGGCTTTAGATGATGGGTATTTTAGGAGGAATTATTCAGCTATGGCAGCAGCGGCAGCTGCAGCAGAGGTTGATGAGGATGAGGACGAAGTGGAGGAGGAGGATGAGGAAGATGACGAGAGGGGAAGTGAGGTTGAGGAGGGGGAGAGGGAAAGGGAAGGGATGAGGAGGTTGGCGAAGGCGATAGAAAGGTTTGGAGAGATGTATGAGAGAGTGGAGAGAGAAAAACTGAGGCAGATGGTGGATTTGGAAAAACAGAGGATGCAGTTCGCTAAAGATCTCGAAGTTCAGAGGATGCAGATGTTTATGGACACGCAGGTTCAGCTGGAGAGGATAAAGCGTGGCAAGAGATCTGGGTCTAACGAAGAAAGAAGAAAGAAGATAGTACGGCATCCAGTTTAG 888 0.5282 MADLQDGLTPPATNHRPMPVREDCWSEEATSTLVDAWGRRFLELNKGNLRQKDWQDVADAVNALHGLTKKTHRTDVQCKNRIDTIKKKYKVEKARVVSSNGNVSSSWPFFERLDALIGSNYNSKKSSPSPPVALPLPYRKTQSPPVTAVPASVALPQKRSAVPALDDGYFRRNYSAMAAAAAAAEVDEDEDEVEEEDEEDDERGSEVEEGEREREGMRRLAKAIERFGEMYERVEREKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNEERRKKIVRHPV 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2053 295 Pfam Myb/SANT-like DNA-binding domain 22 116 IPR044822 -
Prci11g2053 295 Gene3D - 25 91 - -
Prci11g2053 295 FunFam trihelix transcription factor ASIL2 25 91 - -
Prci11g2053 295 Coils Coil 217 256 - -
Prci11g2053 295 MobiDBLite consensus disorder prediction 272 295 - -
Prci11g2053 295 MobiDBLite consensus disorder prediction 184 206 - -
Prci11g2053 295 Coils Coil 179 199 - -
Prci11g2053 295 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 278 IPR044823 -
Prci11g2053 295 MobiDBLite consensus disorder prediction 120 143 - -
Prci11g2053 295 MobiDBLite consensus disorder prediction 182 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2053 Prci-Chr11 18205052 18210359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2053 21 283 Trihelix Transcription Factor Family AT3G14180 34.857 8.74e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci11g2053 Myb_DNA-bind_4 4.5e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2053 - - gmx:100785349 387.111