Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2006 ATGTCAGAAGACGAACACGAGATTTATAATGACAAAGATAATAAGTGTAATGAGGAAACTTCGCTGGGGTCTTGTTCCCACAAGTGTTCATCGTTTGACTTGAATGAGGAAGCTACCAGTGAAGAAGAAGAACAAGAACAGGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAGAACGAGAAAATGAAGGAACACGAGGGAACTTCATCGACAAATAGAAGCACATCTAGAGAACGAAATGAAGGAAAAAGCACTGTAAGACAATACGTCAGATCCAAGATGCCTAGGCTTCGGTGGACCCCAGATCTTCATCTCTCTTTCGTTCATGCAGTTAAACGGCTCGGTGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTACAGCTGATGAATGTGAGAGGACTCAGCATTGCTCATGTGAAGAGTCACTTGCAGATGTATCGGAGCAAAAAACTTGATGAGGCTGGGCAAGTGATAAATCAAACGTACAGATCCTCCCAAATTGGTCGTGTTTCGCAGTTATCGTATCAATCTGTGAATACAAGACAACAATTCAAGATGGGAAATGGTGGAATTATTCTAACGAGCAATTGCAACGACCATAGTGGGTTTGTTCATGGCCTCTCCAAGCCTTATTTTACCCACCCACATACAATGGCTACAGAGTCAAGGCATCAACAATGGCAGTTAAATAACGAGTGGTATAGAAGGCAAATTTGCATGACAAGCAACCAAGTGATGATGCCCTCAATAACAGACCGAATTGCACCAATTAGAGGCAGCCAATTCCTGGAAGAGAGAAAGTGGCCTCCATTATTAGACACTCTAAGTAATCACAACAATAATAACCATTATTGGAAGTTCAATAAGATGTCACCTACGAGTAGCCATATTATTAATACTTGGGCTGATTCACAATCTGGATTTCACCAACTTGGTGCCAATATGCATGCATCTGTGGAGCCACCTGATGATCATTGGAGATTTGGAAATAATGTCAACACTTGTACCAACAATTCCAAGAGTTTAAAGCTTGAATTTGAGCCCCCATTTCGGATCAAGTTAAATGAAGAGAAACAGGAGAAAGACGAGCGAATGTTGCCTGATCTGCAACTAGGATTGAATTATCAGAATGCTGATGATTGCAAAGAAGCTCAAGAAATTAACACTAAGCTTTCTCTTTCTTAG 1188 0.4167 MSEDEHEIYNDKDNKCNEETSLGSCSHKCSSFDLNEEATSEEEEQEQEEEEEEEEEEEENEKMKEHEGTSSTNRSTSRERNEGKSTVRQYVRSKMPRLRWTPDLHLSFVHAVKRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVINQTYRSSQIGRVSQLSYQSVNTRQQFKMGNGGIILTSNCNDHSGFVHGLSKPYFTHPHTMATESRHQQWQLNNEWYRRQICMTSNQVMMPSITDRIAPIRGSQFLEERKWPPLLDTLSNHNNNNHYWKFNKMSPTSSHIINTWADSQSGFHQLGANMHASVEPPDDHWRFGNNVNTCTNNSKSLKLEFEPPFRIKLNEEKQEKDERMLPDLQLGLNYQNADDCKEAQEINTKLSLS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2006 395 FunFam Myb family transcription factor 94 152 - -
Prci11g2006 395 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 69 188 IPR046955 GO:0003700
Prci11g2006 395 NCBIfam myb-like DNA-binding domain, SHAQKYF class 96 151 IPR006447 GO:0003677
Prci11g2006 395 Pfam Myb-like DNA-binding domain 98 148 IPR001005 -
Prci11g2006 395 Gene3D - 95 152 - -
Prci11g2006 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 152 IPR017930 -
Prci11g2006 395 MobiDBLite consensus disorder prediction 36 61 - -
Prci11g2006 395 SUPERFAMILY Homeodomain-like 94 150 IPR009057 -
Prci11g2006 395 MobiDBLite consensus disorder prediction 19 33 - -
Prci11g2006 395 Coils Coil 31 69 - -
Prci11g2006 395 MobiDBLite consensus disorder prediction 1 18 - -
Prci11g2006 395 MobiDBLite consensus disorder prediction 1 89 - -
Prci11g2006 395 MobiDBLite consensus disorder prediction 62 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2006 Prci-Chr11 17341142 17348877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2006 87 167 G2-like Transcription Factor Family AT2G42660 71.605 1.48e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci11g2006 Myb_DNA-binding 7.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2006 - - pcin:129286853 755.362