Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2001 ATGCCCATCTTTTATAAAGTGAATCCGATGGATGTTCAACATCAGACAAATAGCTTTGGAGAAGCCATGGCTGCCCATGAAAATAGGTTCAGAAATGATATGGAGAAAGTGCGCAAATGGAGGTCTGCTTTGTCTGAAGCTGCTAGTCTGTCATCGGCATGGCTTTTTGAAGATGGAAATGAATCCGGGTTTATTGAAAGGATCGTTGAAGATGCATTTGTCATGCTACCTCCTAAACGCCTGCATAGCATTGATTACATCGTTGGACTTGAGTCCTGCATAGAAGACGTGATGTCACTTCTGGATCAATTAGATGATGGAGTTTGTATCTTGGGGATTCATGGAACTGGTGGAATTGGCAAAACAACTCTTCCCAAAGCTTTGTATAATTTAATTTTCTACCAATATGATGGTGCATGTTTTCTATTTGATGTCACAGAAGCTTCAAAGCAATACCAAGGCATGGTTCATCTCCAACAGACACTTCTATCAGAGATTCTTGAGGAAAGGATGAAGTTGGGCAGTGTTGATGAAGGAATATCTAAAATAAAACACAGACTCTCTCACAAAAGAGTTCTTTTGGTTCTTGATGATGTTGATGAGCTAGAACAGTTAGAAAAACTTGCTGGAAGCTCTAAATGGTTTGGTTCTGGAAGCAAGGTTATTATAACCACAAGAAATAAGCAATTACTAATTGCACATCATGTTGAAAAAACATATGAAATGAAGAAGCTAAATGATCATGATGCTATGGAACTTTTTTGTTGGCATGCCTTCCATATGAACCAACCTCCAAAATGCTATCAAGATATGTCTGGTCGTTTAATAAGTTATGCACAGGGCCTTCCTTTGGCTTTAAGGGTAATAGGTAGTAACTTGGCTCAAAAGAACATTGAAGAATGGAGATTTACACTTGAACAATATGAAAGGATCCCAGAAAAAACAATTCATGAGGTGCTAAAGATAAGTTATGATTGCTTACAGGATATGGCTAAGAGTATTTTCTTGGATATTGCTTGTTTCTTCAAGAATATGATGAAATATATTGAAGAAATACCAGAGGCTTATGATTATGGGGTCAGGTTTTTTATTGAAGTGCTTGTTGATAAATCTCTTATAACTGTTAGTAATAATGGCCGGTTTTGGATGCATGATCTGGTACAAAAAATGGGTAGAGAGATTGTTAGGCAAGAGGCACCATCAAATCTAGGTAAACGCAGTAGACTGTGGTATTATGGAGATGTTCTAAGGGTACTGCATGAAAATTTGGGAAGTAGTGATATTGAAGGAATAATGCTTGATCCACCGCAACAAGAAGTGGAGTGGAATGGTACTGCCTTTGAGAATATGATTAATCTCAGAATTCTCATTGTTCGAAATGCCAAGTTTTCTACAGGTGCTAAATATTTTCCAAGTTGTTTAAGATTGCTTGATTGGGATGGATACCCTTCTATGACTCTACCGCCAGATTTTTATCCTAAGAAATTAGTTTGCTTCAAGTTATGTGGTAGTCATTTCAGACTGGGAGAGACATTCAAGAGATTTGAGTTTGTGACATATATGGATTTCTCTCGTTGTGAGTCCATAACTGAAATACCTGACTTGTCTCAATTTCAAAATTTGAAAAAATTGTTGTTCAATGAATGCAACAATTTGATCAAGGTCCATGATTCTGTGGGATCTCTTTCTAAGTTGGTTGAATTAGATGTTAGTGGTTGTCCCAAACTTAGAAGCTTTCCACGTGAAATCAATATGGCATCACTTGTATCCCTTCAACTAAGTTACTGTAAGAATCTTGACTGCTTTCCAAATATAGTGGGAAAGATGGATGCACTAAGGGATATTTTTGCAGTGGACACTGCTATTAAAGAGCTCCCACATTCCATTGGAAATCTTTCAGGGCTTCAAATTTTTGATATGAGCTCTTGCAAAAGTCTTAGGGAGCTTCCAAATAGCTTATTCATGCTGCAAAGTCTTAGCTGGCTTGAATTGGGTGACACTCGAAGTTGCTGCAAAAAATCAATAAAGAAATTAGAGCAGCAAAGCCTGCAAGTGAATAGCTGCACCAACTTAGAGATCTTGAATCTTGAAAATTGCTGTCTATTGGATGAAGATCTTCGCCTCACTCTGAATTGTTTTCAGAACTTGGAGATTTTGGTTCTATCCGGGAATGATTTTGTATCCCTTCCCAACTGCATTAAAGAGTGTGCTAATTTGTTAAATCTGGAAGTGAATAACTGCAAGAATCTAAGAGACATATCAGAGCTTCCATTGAAGTTGGAGATCATCAAGGCAGAGAACTGCACATCATTAACTACAGAGTCATCAAGTCGTTTATGGTCTCAGGCAATGAAGGAGATCAATGGCCTTGAAATCCGCATGCCTGCAACATTGTTTCCAGATTGGTTTGATAATTGCTGTGAAGGAAGGAGCTTGTCTTTTCATGCTCGTGAGAATTTCCCTGTTGTTGCCTTGGCATTTGAGTTCGGGAAAGCAAATGCAAATGCAGGATTGAAGAACTTCCGCCTTTGTTTGAACATCAGATCTTGTAAAATAGAAAAGAAAATTTTAAGTCAAATGGTTTATGCAAGTAGAGAAGGTCACGTGTTTTTATTCAATCCAAGAAGGGCTTTTGAGAGAGAAGAGTGGATGAGCCTTAATAGGTTTTTGAAAGGGGATTGA 2682 0.3788 MPIFYKVNPMDVQHQTNSFGEAMAAHENRFRNDMEKVRKWRSALSEAASLSSAWLFEDGNESGFIERIVEDAFVMLPPKRLHSIDYIVGLESCIEDVMSLLDQLDDGVCILGIHGTGGIGKTTLPKALYNLIFYQYDGACFLFDVTEASKQYQGMVHLQQTLLSEILEERMKLGSVDEGISKIKHRLSHKRVLLVLDDVDELEQLEKLAGSSKWFGSGSKVIITTRNKQLLIAHHVEKTYEMKKLNDHDAMELFCWHAFHMNQPPKCYQDMSGRLISYAQGLPLALRVIGSNLAQKNIEEWRFTLEQYERIPEKTIHEVLKISYDCLQDMAKSIFLDIACFFKNMMKYIEEIPEAYDYGVRFFIEVLVDKSLITVSNNGRFWMHDLVQKMGREIVRQEAPSNLGKRSRLWYYGDVLRVLHENLGSSDIEGIMLDPPQQEVEWNGTAFENMINLRILIVRNAKFSTGAKYFPSCLRLLDWDGYPSMTLPPDFYPKKLVCFKLCGSHFRLGETFKRFEFVTYMDFSRCESITEIPDLSQFQNLKKLLFNECNNLIKVHDSVGSLSKLVELDVSGCPKLRSFPREINMASLVSLQLSYCKNLDCFPNIVGKMDALRDIFAVDTAIKELPHSIGNLSGLQIFDMSSCKSLRELPNSLFMLQSLSWLELGDTRSCCKKSIKKLEQQSLQVNSCTNLEILNLENCCLLDEDLRLTLNCFQNLEILVLSGNDFVSLPNCIKECANLLNLEVNNCKNLRDISELPLKLEIIKAENCTSLTTESSSRLWSQAMKEINGLEIRMPATLFPDWFDNCCEGRSLSFHARENFPVVALAFEFGKANANAGLKNFRLCLNIRSCKIEKKILSQMVYASREGHVFLFNPRRAFEREEWMSLNRFLKGD 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2001 893 Gene3D - 244 328 IPR042197 -
Prci11g2001 893 Pfam TIR domain 1 71 IPR000157 GO:0007165
Prci11g2001 893 SUPERFAMILY L domain-like 398 781 - -
Prci11g2001 893 SUPERFAMILY "Winged helix" DNA-binding domain 315 419 IPR036390 -
Prci11g2001 893 Gene3D - 1 80 IPR035897 -
Prci11g2001 893 Gene3D - 81 240 IPR027417 -
Prci11g2001 893 Gene3D Ribonuclease Inhibitor 414 612 IPR032675 -
Prci11g2001 893 PRINTS Disease resistance protein signature 279 293 - -
Prci11g2001 893 PRINTS Disease resistance protein signature 110 125 - -
Prci11g2001 893 PRINTS Disease resistance protein signature 630 646 - -
Prci11g2001 893 PRINTS Disease resistance protein signature 186 200 - -
Prci11g2001 893 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 655 IPR044974 GO:0006952
Prci11g2001 893 Pfam NB-ARC domain 93 326 IPR002182 GO:0043531
Prci11g2001 893 Gene3D Ribonuclease Inhibitor 613 863 IPR032675 -
Prci11g2001 893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 338 IPR027417 -
Prci11g2001 893 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 50 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2001 Prci-Chr11 17318374 17325739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2001 2 664 WRKY Transcription Factor Family AT4G12020 32.216 9.50e-86 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2001 - - pcin:129285870 1060.83