Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2000 ATGTTGGGGATCTATGGAACTGGTGGAATTGGCAAAACAACCCTTGCCAAGGCTCTGTATAATTCAATCTTCTACCAGTTTGATGGTGCAAGCTTTCTATTCGATGTCAGAGAAGCTTCAAAGCAATATCGAGGCATAATTCGTCTCCAACAGACACTTCTTTCTGAGATTCTTGAGGAGAAGAGGATGAAGTTGGGCAGTGTTGATGAAGGAATATCTAAAATAATACACAGACTCTCTTGCAAAAGAATTCTTTTGGTTCTTGATGATGTTGATGAGGTAGAACAATTAGAACTGCTAGCAGGAAGCTGTCATTGGTTTGGTCCTGGTAGCAAGATCATTATAACAACAAGAAATATACAATTGCTAACTGCACATCGTGTTGAAACATATGAAATGAAGAATTTAAATGACCATGACTCTCTTGAGCTGTTTTGTTGGCATGCTTTTCACATGAGGCAGCCTCCTAAAGCCTATGAAGATATGTCTATTCATGTGATCGATTATGCACAAGGCCTCCCTTTGGCTTTGAGGGTAATAGGCTCCAATTTGGCTTCTAAAAGCTTAGATGAATGGAGATCGACGATGGAACAATATGAGAGGATCCCAGAAAGGACAATTCATGAGGTGCTAAAGATAAGCTATGATTGCTTGCAGGACAATGCCAAATGTATTTTCCTGGATATTGCTTGTTTCTTTAAGAAAAGGAGATTGGAATATGTTGAAGAAATACTAGACGCATGTGATTTTGGTGCAAGGTTCTATATTGAAGTTCTTGTTGATAAATCTCTTGTAACTATTAACGACAGTGGCTCCTTGTGGATGCATGATCTAATGCAAGAGATGGGTAGAGAGATTGTTAGGCAGGAAGCACCCTTAAATCCTAGCCAACGTAGCAGATTATGGTATCATGAAGATGTTATTAGAGTACTATCTGAAAATTCAGGAAGCAGCAAAATTGAAGGAATAATGCTTTGGCCCCCTCAACAAGAAGAAGTGGAGTGGACTGGCCATGCCTTTGAGAAGATGGAGAATCTTAGGATTCTCATTGTTCGAAATGCACGCTTTACAACTGGTCCTAAACACTTACCAAACAACTTAAGAGTGCTCGATTGGGAGGGATACCCTTCTATGACTTTACCACGGGATTTTTATCCTCTGAAAATTGTTGTTTTGAGGTTATGTCGTAGTCATGTCAGACTCGGAGAGCCGTTCATGAGGTTTGAATATGTGACAAACATGTATTTCTCACAGTGTGAGTTTATAACTGAAGTACCTGATATGTCACAAGTCCCAAATTTAAGAGAATTGATATTTAGAGACTGTTGCAATTTGATCAAGGTTCATCATTCTGTGGGTTCTCTCTCTAAGCTGGTTCAGTTAGATGTTAGTGGCTGCACCAAACTTAATAGCTTTCCTCATGAAATCAAGATGGCATCTCTCAAATCCCTTGACCTCAGTAATTGCAAGAGTCTTGACTACTTCCCTAATATAGTGGGAAAGATGGGTGCGTTAAGGACCATTCTTGCAGAAAACACTGCCATCAATGAACTGCCAGATTCCATTGGAAATCTTTCAGGTCTTCAGCTTTTAGATATGAACTCCTGTAAAAGTCTTAGGGAGCTTCCGATCAGCTTATTCAAATTGCAAAGCCTTAGCTGGCTTCTGTTAGGAGACAGTAGACCTCGTTGCAAAAGATCACTCAAGATATTAATGCAAGAGAGCTACCCAATTATGAGATGTACAAACTTAGAGATCTTGAATCTCGAAAATTGTTGTCTATCAGACGAAGATCTTCACCTAACTCTGAATCGTTTTCAAAATTTGCAAGAATTAATTCTATCAGGGAATGATATTGTGGCCCTTCCTGAGTGCATTAAAGAGTGTGCTAATCTATTGAAACTGGAGGTGACTAATTGCAAGCAGCTAAGATATGTACCTGAGTTTTCATCTAAGTTGATGATCATAGAGGCTGACCATTGTACATCATTAACTACAGAATCTTCATGCCGATTATGGTCTCAGGTTAGGAAGGAGGTCAATGGCCTGTTAATCAATATGCCCGCATCAGCATTTCCAGATTGGTTTGATCATTGCTACAAAGGAGGGACCTTGTCTTTTCGTGCTCGTGGGAACTTCCCTCGTGTTGCCATAGCAATTGAGTTGCGCAATGTGAATGCAAGTGTCCCATCAAAATCTAAGGGGGAACTAGAAATCAATGTTAAACCTTGGAAGTACATCTCTGGTTGTATTAGCATCAATGGTCGTAAAGTAGAAGGGGGAAGAGAGGCAAAGAATAACTTGGTGCAGCAACCAGTTAGAGAAGGTCATGTGGCATTGTTTGATCTAAGTCAGCATTTTGGGGAAAAGGGGTGCAAGATCCATGATGGCTTTATGGAACGAGACTGGAATGATGTGGAAATAGAATTCAAATGTGGATCTCCAAATTTGTCCATTGTTAACTGTGGAATTTATGTGTACAAACAGCAAACAAACGTGGAGAATGTCCAGTTCAAGTCTTCTCTGCTTTCCATTAATGCTCCAAGAACTTTATTGAAACGGAAAGCTATAGCTTCTCCTTCTTATGAATCAACCAAAAAGTTCACGAGGAACTTCAAGACTACTGATAAACCAAAGCTACATAACCTAAAAACAAGGACAATGCGGGAGGAGAGCTAA 2679 0.3983 MLGIYGTGGIGKTTLAKALYNSIFYQFDGASFLFDVREASKQYRGIIRLQQTLLSEILEEKRMKLGSVDEGISKIIHRLSCKRILLVLDDVDEVEQLELLAGSCHWFGPGSKIIITTRNIQLLTAHRVETYEMKNLNDHDSLELFCWHAFHMRQPPKAYEDMSIHVIDYAQGLPLALRVIGSNLASKSLDEWRSTMEQYERIPERTIHEVLKISYDCLQDNAKCIFLDIACFFKKRRLEYVEEILDACDFGARFYIEVLVDKSLVTINDSGSLWMHDLMQEMGREIVRQEAPLNPSQRSRLWYHEDVIRVLSENSGSSKIEGIMLWPPQQEEVEWTGHAFEKMENLRILIVRNARFTTGPKHLPNNLRVLDWEGYPSMTLPRDFYPLKIVVLRLCRSHVRLGEPFMRFEYVTNMYFSQCEFITEVPDMSQVPNLRELIFRDCCNLIKVHHSVGSLSKLVQLDVSGCTKLNSFPHEIKMASLKSLDLSNCKSLDYFPNIVGKMGALRTILAENTAINELPDSIGNLSGLQLLDMNSCKSLRELPISLFKLQSLSWLLLGDSRPRCKRSLKILMQESYPIMRCTNLEILNLENCCLSDEDLHLTLNRFQNLQELILSGNDIVALPECIKECANLLKLEVTNCKQLRYVPEFSSKLMIIEADHCTSLTTESSCRLWSQVRKEVNGLLINMPASAFPDWFDHCYKGGTLSFRARGNFPRVAIAIELRNVNASVPSKSKGELEINVKPWKYISGCISINGRKVEGGREAKNNLVQQPVREGHVALFDLSQHFGEKGCKIHDGFMERDWNDVEIEFKCGSPNLSIVNCGIYVYKQQTNVENVQFKSSLLSINAPRTLLKRKAIASPSYESTKKFTRNFKTTDKPKLHNLKTRTMREES 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2000 892 Gene3D - 135 219 IPR042197 -
Prci11g2000 892 Gene3D Ribonuclease Inhibitor 504 675 IPR032675 -
Prci11g2000 892 ProSiteProfiles NACHT-NTPase domain profile. 1 94 IPR007111 -
Prci11g2000 892 Pfam NB-ARC domain 2 204 IPR002182 GO:0043531
Prci11g2000 892 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 545 IPR044974 GO:0006952
Prci11g2000 892 Gene3D Ribonuclease Inhibitor 333 503 IPR032675 -
Prci11g2000 892 PRINTS Disease resistance protein signature 1 16 - -
Prci11g2000 892 PRINTS Disease resistance protein signature 170 184 - -
Prci11g2000 892 PRINTS Disease resistance protein signature 476 492 - -
Prci11g2000 892 PRINTS Disease resistance protein signature 78 92 - -
Prci11g2000 892 SUPERFAMILY L domain-like 274 664 - -
Prci11g2000 892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 229 IPR027417 -
Prci11g2000 892 Gene3D - 1 132 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2000 Prci-Chr11 17301080 17305565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2000 2 656 WRKY Transcription Factor Family AT4G12020 31.487 8.17e-80 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2000 - - pcin:129284776 966.452