Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1998 ATGGAGATCAAAGGGTCAACACCATCGTCCTCTAGCTTCCCATCTAAAACTAAGTACAGATATGATGTTTTCTTGAGTTTCAGAGGCGAAGATACTCGTCAATCCTTCACTGTGCTTCTATATGATGCCTTGCACAGGAGGGGAATCAACACCTTCATTGATGACAAGAAGCTTGGCAAAGGGAAACGAATCTCACCTTCACTTCTTAAGGCCATTGATAGATCCAGGATTTCAATTATTGTCTTCTCTAGAAACTACGCCACTTCCACTTGGTGTTTGGATGAACTGGCGCACGTCATTCGATGTAAGAAGGAGAAGAACCAGATGGTTATGCCTATCTTCTACAAGGTGGATCCGTTGGATGTTCAGTATCAGAGGAATAGCTTTGGGGAAGCCATGGCTGCTCTTGAAGATAGGTTCAGGCATGACATGGATAAAGTGAGCAAATGGAGGTTTGCTTTGTCTGAAGCTGCTAGTCTGTCATCGGCATGGCTTTTTCAAGATGGATGTAAACTTGGGTTTATAGAAAGGATAGCAGAAGATACATATGCTATGCTGCCACCCAAACCCTTACATAGTATTGACCACACAGTTGGACTTGATTCTCGCATTGAAGAAGTGAAGTCACTTTTGGATCAGTCTGATAATGGAGTTTGTATGTTGGGCATCCATGGAACTGGTGGAATTGGCAAAACAACACTTGCCAAGGCTCTATATAATTCAATATTTTACCACTTTGAAGGTTCATGTTTCCTATTTGATGTCAGAGAAGCTTCAAAGGAATACCAAGGCTTAGTTCGTCTCCAACAATTACTTTTATCAGAGATTCTTGAAGAGAAGAGTAAGAAGTTTGGTAGTGTTGATGAAGGAATATCAAAGATAAAACACAGACTCTCCCACAAAAGAGTTCTATTAGTTCTTGATGATGTTGATGAGGTAGAACAATTAGAACAACTTGCAGGAGGGTGTAATTGGTTTGGATCCGGAAGCAAAATCATTATAACAACCAGAAATATGCAGTTACTAATTGCACATCATGTTCAAAAAACCTATGCAATGAAGGAGCTAAATGGGAATGAGTCTCTTGAACTCTTTTCTTGGCATGCCTTTCATATTCAGCAACCTCCCAAAGGTTATGAAGATATCTCTAATCGTGTGATAAGTTATGCACAGGGCCTTCCTTTGGCTCTAAGAGTAATAGGCTCCAATTTGGCTCACAAGAGCTTAGAGGAATGGAGGTCAATATTGGAACAGTATGAGAAGATCCAGGATAGAACAATTCACGAGGTACTAAAAATAAGTTATGATTGCCTACAAGACAATGCCAAGTCTATTTTTCTAGATGTTGCTTGTTTCTTCAAGAAGTGGAGGTTGGTATATGCCAATGAAATACTACAAGCTTGTCAAGGTGGTGCAAGGTTTTATATCGAAGTGCTCATTGAAAAATCATTAGTGAGCATTGATGAATATGAGTGCTTGTGGTTGCATGATCTAATACAAGAAATGGGTCGAGAAATTGTCAGGCAAGAAGCACCATTAAATCCTGGTGAACGCAGCAGGTTATGGCATCATGAAGATGTTATCAAAGTACTACATGAAAATTCAGGAAGCAGCAAAATTGAAGGAATAATGCTTAAATCTCCTCAACAAGAAGTTGAGTGGAGTGGCTTTGCCTTTGAGAAGATGAACAATCTTAGGGTTCTTATCGTGCGAAATGCATTCTTTTCAACCGGCCCAAGGCACTTTCCGAACAATTTAAGATTGCTTGAATGGGAGGGATATCCTTCTATGACCTTACCAGATGACTTTTCTCCTGAGAACATTGTGGTCCTTAGGTTAAGTCATAGTCATGTTAGATTGGTAGAGCCAATCAAGAGGTTTGAACATGTGACAAATATGAATTTCTCATATTGTGAATTTATAACCGAAGTACCTGACATGTCTCAAGTCCCAAATCTAAAAGAACTGATATTTGCAGACTGTTGCAACTTGATCAAAGTTCATGATTCAGTTGGTTTTCTCTCAAAGTTGGCTATACTAAAGGTTAATGGCTGCACCAAACTTAAAAGATTTCCGCATGAAATCAAGACGATGTCTCTTGAACACCTTGACCTTACTTTTTGTGAGAGTCTTGAATACTTCCCAAATATAGTGGGAAAGATGGATGCATTGAGGACCATTTTTGCAGATAATACTGCCATTGAAGAACTCCCAAATTCCATTGGAAATCTTTCGGGGCTTCAAGTTTTATCCATGAACTCTTGCAAAAGCCTTAGGGAGTTTCCAGACAGAATATTCACATTGGAAAATCTTATCTGGCTTATGTTGGGAGATAGTAGACCTCAGAGCAGAAAATCCTTGAAGAAGTCAATGCAAGATAGCCACCCAATTATTAGAAGCACAAATTTGGAGATCTTGAATCTTGAAAATTGTGGTCTACTGGATGAAGATCTTCACCTAACTCTGAATTGTTTTCGAAACTTGCAAGAATTAAATCTGTCAGGGAATGATATTGTATCCCTTCCTGAATGCATTAAAGAGTGTCCTAATCTAAATAGACTGGAAGTGACAAATTGCAGGAAGCTAAGAGACATACCAGAGCTACCAACGAACCTGGAGGAAATACAGGCAGAAAATTGCATATCATTAACAACAGAGTCCTTAAGCCATTTATGGTCTCAGGCTAAGAAAGAGGTCTTTAACTTGTCAATCGATATGCCAGCATCGACATTTCCAGATTGGCTCAACTATTGCTGCAAAGGAGGGACCTTGTCTTTTCGTGCTCATGGGAATTTCCCAGTGGTTGCATTGGCATTTGAGTGTGAGAAAGCAAGATCAAGGCCTGAAGATGAACTTGAAATGCATGTTTTGCATGGGAGGGTCCTTGGGCGAATGAGCATCAATGGTCATGAAGTATCAAAGGAAGGAGATAATATAGTTTTTCCAGTTAGGGAAGGTCATGTGTGTGTGTTTGATCTGAGAAGAGCTTTTGGTGGGGACGAAGAGTACTGGAAGAGACTTGATAAGTTTCAGGAATTGGATTGGAATGATGTGGAAATAGAAGCCAAATGTCAGTCGCCAGATTTGTGCATAGTTAAGTGTGGAGTTTATGTGTACAAGCAGCAAACGAACGTGGAAAATGTGAATTTCAAGTCTTTGCTTTCCATGAATGACCCAACAACTTCGTTGAAACGAAGAGCTATAGCTTCCCCTCCTAATGAAAGAACCAAGAAGTTGCCAGCAACGTTTTAG 3252 0.3985 MEIKGSTPSSSSFPSKTKYRYDVFLSFRGEDTRQSFTVLLYDALHRRGINTFIDDKKLGKGKRISPSLLKAIDRSRISIIVFSRNYATSTWCLDELAHVIRCKKEKNQMVMPIFYKVDPLDVQYQRNSFGEAMAALEDRFRHDMDKVSKWRFALSEAASLSSAWLFQDGCKLGFIERIAEDTYAMLPPKPLHSIDHTVGLDSRIEEVKSLLDQSDNGVCMLGIHGTGGIGKTTLAKALYNSIFYHFEGSCFLFDVREASKEYQGLVRLQQLLLSEILEEKSKKFGSVDEGISKIKHRLSHKRVLLVLDDVDEVEQLEQLAGGCNWFGSGSKIIITTRNMQLLIAHHVQKTYAMKELNGNESLELFSWHAFHIQQPPKGYEDISNRVISYAQGLPLALRVIGSNLAHKSLEEWRSILEQYEKIQDRTIHEVLKISYDCLQDNAKSIFLDVACFFKKWRLVYANEILQACQGGARFYIEVLIEKSLVSIDEYECLWLHDLIQEMGREIVRQEAPLNPGERSRLWHHEDVIKVLHENSGSSKIEGIMLKSPQQEVEWSGFAFEKMNNLRVLIVRNAFFSTGPRHFPNNLRLLEWEGYPSMTLPDDFSPENIVVLRLSHSHVRLVEPIKRFEHVTNMNFSYCEFITEVPDMSQVPNLKELIFADCCNLIKVHDSVGFLSKLAILKVNGCTKLKRFPHEIKTMSLEHLDLTFCESLEYFPNIVGKMDALRTIFADNTAIEELPNSIGNLSGLQVLSMNSCKSLREFPDRIFTLENLIWLMLGDSRPQSRKSLKKSMQDSHPIIRSTNLEILNLENCGLLDEDLHLTLNCFRNLQELNLSGNDIVSLPECIKECPNLNRLEVTNCRKLRDIPELPTNLEEIQAENCISLTTESLSHLWSQAKKEVFNLSIDMPASTFPDWLNYCCKGGTLSFRAHGNFPVVALAFECEKARSRPEDELEMHVLHGRVLGRMSINGHEVSKEGDNIVFPVREGHVCVFDLRRAFGGDEEYWKRLDKFQELDWNDVEIEAKCQSPDLCIVKCGVYVYKQQTNVENVNFKSLLSMNDPTTSLKRRAIASPPNERTKKLPATF 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1998 1083 Gene3D - 355 439 IPR042197 -
Prci11g1998 1083 Gene3D Ribonuclease Inhibitor 551 722 IPR032675 -
Prci11g1998 1083 SUPERFAMILY L domain-like 548 894 - -
Prci11g1998 1083 PRINTS Disease resistance protein signature 297 311 - -
Prci11g1998 1083 PRINTS Disease resistance protein signature 390 404 - -
Prci11g1998 1083 PRINTS Disease resistance protein signature 220 235 - -
Prci11g1998 1083 PRINTS Disease resistance protein signature 742 758 - -
Prci11g1998 1083 Gene3D - 15 188 IPR035897 -
Prci11g1998 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 448 IPR027417 -
Prci11g1998 1083 Pfam NB-ARC domain 203 428 IPR002182 GO:0043531
Prci11g1998 1083 Pfam TIR domain 21 167 IPR000157 GO:0007165
Prci11g1998 1083 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 770 IPR044974 GO:0006952
Prci11g1998 1083 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 160 IPR035897 -
Prci11g1998 1083 ProSiteProfiles Leucine-rich repeat profile. 827 848 IPR001611 GO:0005515
Prci11g1998 1083 ProSiteProfiles TIR domain profile. 19 158 IPR000157 GO:0007165
Prci11g1998 1083 Gene3D - 189 351 IPR027417 -
Prci11g1998 1083 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Prci11g1998 1083 SUPERFAMILY "Winged helix" DNA-binding domain 426 531 IPR036390 -
Prci11g1998 1083 Gene3D Ribonuclease Inhibitor 723 927 IPR032675 -
Prci11g1998 1083 SMART till_3 20 160 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1998 Prci-Chr11 17294299 17298609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1998 21 861 WRKY Transcription Factor Family AT4G12020 29.432 7.07e-94 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1998 - - pcin:129284776 1271.14