Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1995 ATGGCGATTCAAGTGGCAGCACCAACATCCTTTGGCTTCACCAGCGATTCCAAATATAGATATGATGTTTTCCTGAGTTTCAGAGGCGAAGATACTCGCCACTCCTTCACTGTCATTCTCTACGATTCGTTGCGCCGGAAGGGAATCAATGCCTTCATCGACGACAAGAAGCTTGGCAAAGGGGAACGGATCTCACCTGCGCTACTTAAAGCCATTGAGAAATCAAGGATTTCAATTATTGTGTTCTCTACCAACTACGCTACTTCCACATGGTGCCTCGATGAACTGGCTCACATCGTTCGCTGTAAGAAGGAGAAAAACCAGGTGGTTATGCCAATATTTTACAAGGTGCATCCAATTGATGTACAATATCAAAGAAATAGCTTTGGAGAAGCCTTGGCCGATCATGAAGTCAGGTTCACAAATGACCGGCAGAAAGTGCAGAAATGGAGGTCTGCATTATTTGAAGCTGCTAGTTTGTCATTAGAATGGGTTTTCGAAGATGGATATGAATTTGGGTTTATTGAAAGGATTGTTGAAGATGTATATGCTGTGCTTCCTCCTAAACCATTCCATAACATAGAACACATGGTTGGACTTGAGCCTCGGATAAAAGAAGTGATCTCACTTCTAAATAAATCTGACGATGGTGTTTGCATGTTGGGGATTCATGGAACTGGTGGAATTGGCAAAACAACCCTTGCAAAAGCTATCTATAATTCAATCTTCTACCAGTTTGAAGGTGCATGTTTCTTGTTTGATGTCAGAGAAGCATCAAAGAAATTCCAGGGCATTGTTTGTCTTCAACAGTTACTTCTATCAGAGATTCTTGAGGAAAAGAGGATGAAGTTTGGTAGTGCTGACGAAGGAATATCAAAAATAAAACACAGACTCTCTCATAGAAGAGTTTTGTTGGTTCTTGATGATGTTGATGAGATTGAACAGTTAGAACAACTTGCAGGGGGGTGTGATTGGTTTGGTTGTGGAAGCAAGGTCATTATAACAACAAGAAATAAGCAATTACTGATTGCTTGTAATGTTAAAAGAACATATGAATTGATGGAGCTAAATGATCATGACTCTCTTGAACTCTTCTGTCGGCATGCCTTTCATATGAGCCAACCTCCAAAAGGCTATCAAGATATGTCTAGTCATGTGATACGTTATGCACGGGGCCTTCCTTTGGCTGTGAGATTAATTGGTGCCAATTTAGCACATAAAAACTTAGAGGAATGGAGATCTACATTGGAACAATATGATCGGATCCCAGAAAGAACAATGCATGAAGTACTAAAGATAAGCTATGACTGCTTACAAGATGGTGCTAAGATTATTTTCTTGGATATTGCTTGTTTCTTTAGAGAGGAGTTATTGGATTCTATTGATGAAATAGTAGAAGCATGTGGGTATGGTGCAAGGTTTTATATTGAAGTGCTTATTGATAAATCTTTGATAACTATTACTGAAAATGGTCATTTTTGCATGCATGATCTGATAAAACAAATGGGTAGAGAGATTGTTAGGGAGGAGGCACCATCAAATCCCGGCAAACGTAGTAGATTGTGGTATTATAAAGATGTTCTTGAAGTACTACATGAAAATTCAGGAAGTAGTAATATTGAAGGAATAGTGTTTGATCCACCTCAACAAGAAGAAGTGAACTGGAGTGGTATAGCCTTTAAGAAGATGAATAATCTTAGAATTCTTGTTGTTCGGAAGGGCGAATTTTCAACTGGCCCTAAATATCTTCCCAATAGTTTAAGATGGCTTGAATGGGAGGGATATCCTTCTACAGAACTGCCGCCAAATTTTTCTCCAAACAAACTAGTTTTATTCAAGTTATGTTGCAGTCCTTTCAGGTTGGAAGAGCCATTCAAGAGGTTTGAATATTTGACATGTATGAATTTCTCACACTGTGAATTCATAACTGAAGTACCTGATATGTCTCAATTCCAAAGTTTAAGGAGATTGTTGTTTAAAGACTGCTACAACTTGATCAAAGTTCATGATTCAGTGGGATCTCTCTCCAAGCTGGTTGTATTAGATGTTGGTGGATGTGTCAAACTTACAGGCTTTCCACATGAAATCAATTTGCCATGTCTTACAGATATTGATCTGAGTCATTGCAAGAGTCTTGACTACTTCCCACATATAGTGGGAAAGATGGATGCATTAACAGATGTTTGGGCTGAAGACACTGCTATTAAGGAGCTCCCACCTTCCATTGGAAACCTTGCCGGGCTTGAATCTTTAAATTTAAGCTTCTGCCAAAGTCTCAGGCAGCTTCCAAACAGCTTATTCACGTTGCAAAATCTTAACTGGCTTGATTTGGGAGGCATTCAACCTGATAGCAGAAAATCTTTAAAGAAATTAATGCAAGAGAACCAACCAATTATTAGCTGCACAAACGTACAATTCTTGATTCTCGAAAATTGTTGTCTATTGGATGAAGATATTCACCTAACTCTGAATCTTTTCCGGAATTTGATAGAGTTAAATCTATCAGGGAATGATTTTGTGTCCCTTCCTGAGTGCCTCAAAGAGTGTCGTAAGTTGTTGAAATTGGATATGAATAACTGCAAGAGGCTAAGAGATATACCAGAGTTACCATCAAATTTGCTGTACATACAGGCAGAGAATTGCATTTCATTGACTGCAGAGTCATTAGGCCATTTATGGTCTCAGGCAAAAAAGGAGTTCTTCGGCATGAGAATCATTTTGCCAGCAACACCAACATTTCCTGACTGGTTGGACAATTGGTGTGAAGGAGGGAAATTGTCTTTTCTTGCTTGTAGGAATTTCCCTCACGTGGCCTTTGCATTTGAGTTGGGGAAGGCCAACACAAGTAGGAGGAGACATTCCGTCCAGTTTTCTCTGAGCATCAATGGTCGTGTGATACAAAAGACACATGATGGTATCAAAATTGCACAAGGTCATGTGTCTTTGTTTAATCTTGGAGTTGCTTTTGAGGGAGAAGACTGGATGTGGTCTCAAAGATTTATGGATTTGGATTGGAATGATGTGGAAGTACAAGTGACTTGTTTAACTCCAGTTATGGTGCCAGTAGTTAAGTGTGGAGTTTATGTGTACAAACAACAAACAAACTCAAAGAATATCCAATTCAAGTCTCCTTTGCTTTCCATGAATGCTCCGACATCTTCACTGAAACGAAAATCAGTAGCTTCTCCTTCTAATGAGCCACCCAGCAAGTTCCTAAGAAAGTTCAAGGATGCTGATAAAGGAAAACTCGACAAGACAAATCAAGGTTCAAGGAGAAATAATAAACGACGCCAAAATTTTCATTCACGTTGCAAGAGAAGGATGGTTTTTCCAATGGAGAGAGCGATCAAGTCCTTAGGGGAGAGGCCAAGGGAGGAGAATCTGGAGATGAGTTGGTTAAGGTTAGATGTGGGTATTGGAACTGAGCCATGA 3432 0.3954 MAIQVAAPTSFGFTSDSKYRYDVFLSFRGEDTRHSFTVILYDSLRRKGINAFIDDKKLGKGERISPALLKAIEKSRISIIVFSTNYATSTWCLDELAHIVRCKKEKNQVVMPIFYKVHPIDVQYQRNSFGEALADHEVRFTNDRQKVQKWRSALFEAASLSLEWVFEDGYEFGFIERIVEDVYAVLPPKPFHNIEHMVGLEPRIKEVISLLNKSDDGVCMLGIHGTGGIGKTTLAKAIYNSIFYQFEGACFLFDVREASKKFQGIVCLQQLLLSEILEEKRMKFGSADEGISKIKHRLSHRRVLLVLDDVDEIEQLEQLAGGCDWFGCGSKVIITTRNKQLLIACNVKRTYELMELNDHDSLELFCRHAFHMSQPPKGYQDMSSHVIRYARGLPLAVRLIGANLAHKNLEEWRSTLEQYDRIPERTMHEVLKISYDCLQDGAKIIFLDIACFFREELLDSIDEIVEACGYGARFYIEVLIDKSLITITENGHFCMHDLIKQMGREIVREEAPSNPGKRSRLWYYKDVLEVLHENSGSSNIEGIVFDPPQQEEVNWSGIAFKKMNNLRILVVRKGEFSTGPKYLPNSLRWLEWEGYPSTELPPNFSPNKLVLFKLCCSPFRLEEPFKRFEYLTCMNFSHCEFITEVPDMSQFQSLRRLLFKDCYNLIKVHDSVGSLSKLVVLDVGGCVKLTGFPHEINLPCLTDIDLSHCKSLDYFPHIVGKMDALTDVWAEDTAIKELPPSIGNLAGLESLNLSFCQSLRQLPNSLFTLQNLNWLDLGGIQPDSRKSLKKLMQENQPIISCTNVQFLILENCCLLDEDIHLTLNLFRNLIELNLSGNDFVSLPECLKECRKLLKLDMNNCKRLRDIPELPSNLLYIQAENCISLTAESLGHLWSQAKKEFFGMRIILPATPTFPDWLDNWCEGGKLSFLACRNFPHVAFAFELGKANTSRRRHSVQFSLSINGRVIQKTHDGIKIAQGHVSLFNLGVAFEGEDWMWSQRFMDLDWNDVEVQVTCLTPVMVPVVKCGVYVYKQQTNSKNIQFKSPLLSMNAPTSSLKRKSVASPSNEPPSKFLRKFKDADKGKLDKTNQGSRRNNKRRQNFHSRCKRRMVFPMERAIKSLGERPREENLEMSWLRLDVGIGTEP 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1995 1143 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 869 IPR044974 GO:0006952
Prci11g1995 1143 PRINTS Disease resistance protein signature 220 235 - -
Prci11g1995 1143 PRINTS Disease resistance protein signature 696 712 - -
Prci11g1995 1143 PRINTS Disease resistance protein signature 390 404 - -
Prci11g1995 1143 PRINTS Disease resistance protein signature 297 311 - -
Prci11g1995 1143 SMART till_3 20 160 IPR000157 GO:0007165
Prci11g1995 1143 MobiDBLite consensus disorder prediction 1052 1066 - -
Prci11g1995 1143 Gene3D - 15 188 IPR035897 -
Prci11g1995 1143 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 159 IPR035897 -
Prci11g1995 1143 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Prci11g1995 1143 Pfam NB-ARC domain 204 421 IPR002182 GO:0043531
Prci11g1995 1143 Gene3D - 189 350 IPR027417 -
Prci11g1995 1143 Gene3D - 355 439 IPR042197 -
Prci11g1995 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 449 IPR027417 -
Prci11g1995 1143 Gene3D Ribonuclease Inhibitor 726 899 IPR032675 -
Prci11g1995 1143 MobiDBLite consensus disorder prediction 1052 1102 - -
Prci11g1995 1143 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Prci11g1995 1143 Pfam TIR domain 21 182 IPR000157 GO:0007165
Prci11g1995 1143 Gene3D Ribonuclease Inhibitor 552 725 IPR032675 -
Prci11g1995 1143 SUPERFAMILY L domain-like 495 884 - -
Prci11g1995 1143 MobiDBLite consensus disorder prediction 1070 1091 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1995 Prci-Chr11 17250129 17257279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1995 17 791 WRKY Transcription Factor Family AT4G12020 31.203 5.32e-94 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1995 - - pcin:129286217 1381.7