Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1994 ATGGGAGGGAGGGAGTTTTCTACCACAGCAAAGTCTGATCTGGTGAACAATAGTGGCACTAGAGGCTGTAGACTTATAGTTTTCGAGCAGCATCCCTTCTCGTATAGTTGCTACAAGGACCCATACTCGTTCGCAACAGCTTGGAACCCCGACGACCATGGTTTCCATGCAAGAGAAGGCCCAAATCGAAGGCTTGCGTCACTAATCTCCCATGCTCCCTCAGGTCGGCGTAAACGACGTCGCACCAAGAGCTCCAAGATCAAGGAGGACCTCAAGAACCAGAGGATGACTCACATTGTAGTGGAGCGCAATCGACGAAGACAGATGAATGACTACCTCACGGTGATTCATTCCTTGATGCCTTTGTCTTATGTTTGGGTAATAATCGGGGAGTTTCAGAGCATTTGA 408 0.4902 MGGREFSTTAKSDLVNNSGTRGCRLIVFEQHPFSYSCYKDPYSFATAWNPDDHGFHAREGPNRRLASLISHAPSGRRKRRRTKSSKIKEDLKNQRMTHIVVERNRRRQMNDYLTVIHSLMPLSYVWVIIGEFQSI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1994 135 PANTHER MAX DIMERIZATION, MAD 68 124 - -
Prci11g1994 135 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 92 123 IPR036638 GO:0046983
Prci11g1994 135 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 135 IPR011598 GO:0046983
Prci11g1994 135 MobiDBLite consensus disorder prediction 66 88 - -
Prci11g1994 135 Pfam Helix-loop-helix DNA-binding domain 94 121 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1994 Prci-Chr11 17249493 17250260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1994 76 126 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 58.824 6.20e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci11g1994 HLH 3.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1994 - - pcin:129285632 276.944