Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1993 ATGCTTTGCGCAGGAAGGGAATCAATGCCTTCATCGATGACAAGAAGCTTGGAAAAGGAGAACAAATCTCACCTGCACTACTCAAAGCCATTGAGAAATCGAAGATTTCGATTGTTGTGTTTTCTAGAAACTATGCTACTTCCACGTGGTGCCTCGATGAACTCTCCCACATCATTCAGTGTAAGAAGGAAAGGAACCAGGTGGTCATGCCCATCTTTTACAAGGTGGATCCTTTGGATGTTCAGTATCAGAGAAATAACTTTGGGGAAGCCATGGCTGCTCTTGAAGATAGGTTCAGACATGACATGGAGAAAGTGCAAAAATGGAGGGTCTGCTTTGTCTGAAGCTGCTAGTCTGTCATCAGGATGGCTCTTTGAAGATGGATATGAACCTGGGTTTATTGAACGGATAGTTGAACATGCATATATCATGCTACCTCCTAAACGGTTGCATAACACCGATTACATGGTTGGGTTAAAGCCTCGCATGGAAGAAGTGATGTCACTTTTGGATGAATCTGATGATAGCATTAGCATGTTGGGTATCCATGGAACCGGTGGAATTGGCAAAACAACCCTTGCAAAAGCTGTCTACAATTCAATCTTCTTCCAATTTGAAGGTGCGTGTTTCTTGTTTGATGTCAGAGAAGAGTCAAGAAAATACCAGGGCATGGTTCGCCTTCAACAAACACTTGTATCAGAGATTCTTGAGGAAAAAATGAAGAAGTTTGGTAGTGTTGATGAAGGAATTACTAAAATAAAACACAGGCTCTCTAACAAAAAGGTTTTGTTGGTTCTTGATGATGTTGACGAGGTTGAACAGTTAGAACAACTTGCAGGGGGCTGTGATTGGTTTGGTTGTGGAAGCAAGGTTATTATAACAACAAGAAATAAGCAATTGCTGATTTCGCGTAGTGTTCAAAAGACATATGAAATGAAGGAGCTAAATGAGCATTACTCTCTTGAACTCTTTTGTTGGCATGCGTTTCATATGAACCAACCTCCAATAGACTTTGAAAATATGTCTGGTTGTATTATAAGTTATGTACATGGCCTTCCTTTGGCTTTAAAGTTAATAGGCTCCAATTTGGCACATAAAAACTTAGACGAATGGAGATCTACATTGGAACAATATGAGAGAAGCCCAGAAAGAACAATCCATGGAGTACTGAAAATAAGCTATGATTGCTTACAAGATGGTGCTAAGCAAATTTTCCTTGATATTGCCTGTTTCTTCAAAAAGGAGAGCTTAGAACTGATTGAAGACGTAGAAGCATGTGACTATGGGGCAAGGTTTTATATTGAAGTTCTTGTTGATAAATCTCTTATAAGTATTGATGATAATGGTTGCTTGTACATGCATGATCTAATACAACAAATGGGTAGAGAGATTGTGAGGCAAGAGGCACCATCAAGTCCTGGTAAACGCAGTAGGTTATGGTATTATAAAGATGTTCTTCAAGTACTGCAGAAAAATTTGGGAAGTAGTAATGTTGAGGGAATAATACTTAATCCACCTCGGCGAGAAGTAGTGCAGTGGATCGGTTTAGCCTTCAAGAAGATGAATAATCTTAGGATTCTCATTGTTCGAAATACCCAATTCTTAAGAAGTCCTAAACATCTTCCCAATAGTTTAAGATTACTTGACTGGGAGGGATATCCTTCTATGACTTTACCACCAAAATTTTCTCCTCAAAATTTAGTTTGCTTCAAGTTATATAGAAGTCTTTTCAGATTGGAAGAGCCATTTAAGAAATTTGAACATGTGACACATATGGATTTCTCACATTGTGAATTCATAACTGAAGTACCTGACATGTCTCAATTCCAAAGTCTAAGAAGATTGTTGTTTCAAGGGTGTAGCAATCTGATCAAAGTTCATGATTCAGTGGGATCTCTCTCTAGGGTGGTTAAATTAGATGTTAGTGAATGCGGTAAGCTTACAAGCTTTCCAAGGGAAATCAACATGATATCACTTGAAGTGCTTGATCTTAGCAAATGTAGGAGTCTTGACTACTTCCCAAATATAGTGGGAAAGATGAATGCAGTGACAGGTATTTTTGCAACCGACACTGCTATTAAAGAGCTCCCTCCTTCCATTGGAAATCTTCCACAGCTTGGATATTTAGATATAAGCTCCAACAAAAGTCTTGGGGAGCTTCCAAACAATTTATTCACCTTGCAAAATGTCAAGGACCTTGAGTTAGGAGGCATTCAACCTCATTGCACAAAATCACTCAACAAATTGATGCAACAGAACCAATCATCATTTATTAGCTGCAGAAACTTAGAGCTCTTGGATCTCAGAAATTGTGGTCTATGGGATGAAGATGTTCGCCTTACTATGAAATGTTTTCAGAATGTGAAAGAGTTAAATCTATCAAGGAATGATTTTGTGTCGCTACCTGATTGCATTAAAGAGTGTGCTTATTTGTGGAGACTAGAATTGCAAAATTGCAAGAGACTGAGAAACATACCAGAGCTGCCATCAAGCTTGCGGTACATAATGGCAATGAATTGCTCATCATTAACTACAAAGTCGTTAGGCCATTTATGGTCTCAGGCAAAAGATTGTTTTAACGTGGGAATTGGTATGCCAGCACCAGCAACATTTCCTGGCTGGTTCGACCATTTCTGTAAAGGACATACACTGACTTTTCGTGTTTGTGGGAAAATTTTCCCTCGTGTTGTTATTGCGATTGAATCAGGGAAAGTCAACACGAGGGGGAGACACCTGTTCCTAATTTCTATGAGCATCAATGGTCGTAAAATACAAAGGACACCAAGTGAAGAAGGTCCTGTGTTTGTTTTCTACGGTAAACAAGGTCATATGTTTATATTTGATCTACTTCAGAATTTTGGGGCAGAAGAGTTGGAGGGGCTTAATAAGTTTCTGGGGTTGGATTGGAGTGATGTGGAAATTCAAGTTTCATGTCTCCTACCAAATATGTCCATAGTTAACTGTGGAGTTTATGTGGAGAAGCAGCAAACCAACATGGAGAATAATGTGCAGTTCAAGTCTTCTGATGATGATCATCTGCTTTCCTTGAATGCTTCAAGAACTTCGTTGAATCGAAGAGCAATAACTTGTCCCCCTAATGAACCACCCAATAAGAAGCTCATGAGAAAGTTAAAGGCTCATGATAAAGAAAAGCTCAGCAACAAAATGAAAGGGACAAGGAGAATCAAACGACACCCAATTTTTCATTCTTGTCACAAGAGGAAGGTGTTTTTTCCAATGGGTAAGCATTTTGGGAGATTTTTGCATTATTAG 3273 0.3899 MLCAGRESMPSSMTRSLEKENKSHLHYSKPLRNRRFRLLCFLETMLLPRGASMNSPTSFSVRRKGTRWSCPSFTRWILWMFSIREITLGKPWLLLKIGSDMTWRKCKNGGSALSEAASLSSGWLFEDGYEPGFIERIVEHAYIMLPPKRLHNTDYMVGLKPRMEEVMSLLDESDDSISMLGIHGTGGIGKTTLAKAVYNSIFFQFEGACFLFDVREESRKYQGMVRLQQTLVSEILEEKMKKFGSVDEGITKIKHRLSNKKVLLVLDDVDEVEQLEQLAGGCDWFGCGSKVIITTRNKQLLISRSVQKTYEMKELNEHYSLELFCWHAFHMNQPPIDFENMSGCIISYVHGLPLALKLIGSNLAHKNLDEWRSTLEQYERSPERTIHGVLKISYDCLQDGAKQIFLDIACFFKKESLELIEDVEACDYGARFYIEVLVDKSLISIDDNGCLYMHDLIQQMGREIVRQEAPSSPGKRSRLWYYKDVLQVLQKNLGSSNVEGIILNPPRREVVQWIGLAFKKMNNLRILIVRNTQFLRSPKHLPNSLRLLDWEGYPSMTLPPKFSPQNLVCFKLYRSLFRLEEPFKKFEHVTHMDFSHCEFITEVPDMSQFQSLRRLLFQGCSNLIKVHDSVGSLSRVVKLDVSECGKLTSFPREINMISLEVLDLSKCRSLDYFPNIVGKMNAVTGIFATDTAIKELPPSIGNLPQLGYLDISSNKSLGELPNNLFTLQNVKDLELGGIQPHCTKSLNKLMQQNQSSFISCRNLELLDLRNCGLWDEDVRLTMKCFQNVKELNLSRNDFVSLPDCIKECAYLWRLELQNCKRLRNIPELPSSLRYIMAMNCSSLTTKSLGHLWSQAKDCFNVGIGMPAPATFPGWFDHFCKGHTLTFRVCGKIFPRVVIAIESGKVNTRGRHLFLISMSINGRKIQRTPSEEGPVFVFYGKQGHMFIFDLLQNFGAEELEGLNKFLGLDWSDVEIQVSCLLPNMSIVNCGVYVEKQQTNMENNVQFKSSDDDHLLSLNASRTSLNRRAITCPPNEPPNKKLMRKLKAHDKEKLSNKMKGTRRIKRHPIFHSCHKRKVFFPMGKHFGRFLHY 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1993 1090 MobiDBLite consensus disorder prediction 1 21 - -
Prci11g1993 1090 Gene3D - 145 310 IPR027417 -
Prci11g1993 1090 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 75 722 IPR044974 GO:0006952
Prci11g1993 1090 Gene3D Ribonuclease Inhibitor 510 683 IPR032675 -
Prci11g1993 1090 PRINTS Disease resistance protein signature 349 363 - -
Prci11g1993 1090 PRINTS Disease resistance protein signature 179 194 - -
Prci11g1993 1090 PRINTS Disease resistance protein signature 256 270 - -
Prci11g1993 1090 PRINTS Disease resistance protein signature 654 670 - -
Prci11g1993 1090 Pfam NB-ARC domain 162 384 IPR002182 GO:0043531
Prci11g1993 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 408 IPR027417 -
Prci11g1993 1090 Gene3D Ribonuclease Inhibitor 684 856 IPR032675 -
Prci11g1993 1090 Gene3D - 314 398 IPR042197 -
Prci11g1993 1090 SUPERFAMILY L domain-like 465 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1993 Prci-Chr11 17237154 17245513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1993 111 826 WRKY Transcription Factor Family AT4G12020 30.623 3.35e-79 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1993 - - pcin:129284776 1206.05