LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g1992	ATGCTTTGCGCAGGAAGGGAATCAATGCCTTCATCGATGACAAGAAGCTTGGAAAAGGAGAACAAATCTCACCTGCACTACTCAAAGCCATTGAGAAATCGAAGATTTCGATTGTTGTGTTTTCTAGAAACTATGCTACTTCCACGTGGTGCCTCGATGAACTCTCCCACATCATTCAGTGTAAGAAGGAAAGGAACCAGGTGGTCATGCCCATCTTTTACAAGGTGGATCCTTTGGATGTTCAGTATCAGAGAAATAACTTTGGGGAAGCCATGGCTGCTCTTGAAGATAGGTTCAGACATGACATGGAGAAAGTGCAAAAATGGAGGGTCTGCTTTGTCTGAAGCTGCTAGTCTGTCATCAGGATGGCTCTTTGAAGATGGATATGAACCTGGGTTTATTGAACGGATAGTTGAACATGCATATATCATGCTACCTCCTAAACGGTTGCATAACACCGATTACATGGTTGGGTTAAAGCCTCGCATGGAAGAAGTGATGTCACTTTTGGATGAATCTGATGATAGCATTAGCATGTTGGGTATCCATGGAACCGGTGGAATTGGCAAAACAACCCTTGCAAAAGCTGTCTACAATTCAATCTTCTTCCAATTTGAAGGTGCGTGTTTCTTGTTTGATGTCAGAGAAGAGTCAAGAAAATACCAGGGCATGGTTCGCCTTCAACAAACACTTGTATCAGAGATTCTTGAGGAAAAAATGAAGAAGTTTGGTAGTGTTGATGAAGGAATTACTAAAATAAAACACAGGCTCTCTAACAAAAAGGTTTTGTTGGTTCTTGATGATGTTGACGAGGTTGAACAGTTAGAACAACTTGCAGGGGGCTGTGATTGGTTTGGTTGTGGAAGCAAGGTTATTATAACAACAAGAAATAAGCAATTGCTGATTTCGCGTAGTGTTCAAAAGACATATGAAATGAAGGAGCTAAATGAGCATTACTCTCTTGAACTCTTTTGTTGGCATGCGTTTCATATGAACCAACCTCCAATAGACTTTGAAAATATGTCTGGTTGTATTATAAGTTATGTACATGGCCTTCCTTTGGCTTTAAAGTTAATAGGCTCCAATTTGGCACATAAAAACTTAGACGAATGGAGATCTACATTGGAACAATATGAGAGAAGCCCAGAAAGAACAATCCATGGAGTACTGAAAATAAGCTATGATTGCTTACAAGATGGTGCTAAGCAAATTTTCCTTGATATTGCCTGTTTCTTCAAAAAGGAGAGCTTAGAACTGATTGAAGACGTAGAAGCATGTGACTATGGGGCAAGGTTTTATATTGAAGTTCTTGTTGATAAATCTCTTATAAGTATTGATGATAATGGTTGCTTGTACATGCATGATCTAATACAACAAATGGGTAGAGAGATTGTGAGGCAAGAGGCACCATCAAGTCCTGGTAAACGCAGTAGGTTATGGTATTATAAAGATGTTCTTCAAGTACTGCAGAAAAATTTGAAATTTGAACATGTGACACATATGGATTTCTCACATTGTGAATTCATAACTGAAGTACCTGACATGTCTCAATTCCAAAGTCTAAGAAGATTGTTGTTTCAAGGGTGTAGCAATCTGATCAAAGTTCATGATTCAGTGGGATCTCTCTCTAGGGTGGTTAAATTAGATGTTAGTGAATGCGGTAAGCTTACAAGCTTTCCAAGGGAAATCAACATGATATCACTTGAAGTGCTTGATCTTAGCAAATGTAGGAGTCTTGACTACTTCCCAAATATAGTGGGAAAGATGAATGCAGTGACAGGTATTTTTGCAACCGACACTGCTATTAAAGAGCTCCCTCCTTCCATTGGAAATCTTCCACAGCTTGGATATTTAGATATAAGCTCCAACAAAAGTCTTGGGGAGCTTCCAAACAATTTATTCACCTTGCAAAATGTCAAGGACCTTGAGTTAGGAGGCATTCAACCTCATTGCACAAAATCACTCAACAAATTGATGCAACAGAACCAATCATCATTTATTAGCTGCAGAAACTTAGAGCTCTTGGATCTCAGAAATTGTGGTCTATGGGATGAAGATGTTCGCCTTACTATGAAATGTTTTCAGAATGTGAAAGAGTTAAATCTATCAAGGAATGATTTTGTGTCGCTACCTGATTGCATTAAAGAGTGTGCTTATTTGTGGAGACTAGAATTGCAAAATTGCAAGAGACTGAGAAACATACCAGAGCTGCCATCAAGCTTGCGGTACATAATGGCAATGAATTGCTCATCATTAACTACAAAGTCGTTAGGCCATTTATGGTCTCAGGCAAAAGATTGTTTTAACGTGGGAATTGGTATGCCAGCACCAGCAACATTTCCTGGCTGGTTCGACCATTTCTGTAAAGGACATACACTGACTTTTCGTGTTTGTGGGAAAATTTTCCCTCGTGTTGTTATTGCGATTGAATCAGGGAAAGTCAACACGAGGGGGAGACACCTGTTCCTAATTTCTATGAGCATCAATGGTCGTAAAATACAAAGGACACCAAGTGAAGAAGGTCCTGTGTTTGTTTTCTACGGTAAACAAGGTCATATGTTTATATTTGATCTACTTCAGAATTTTGGGGCAGAAGAGTTGGAGGGGCTTAATAAGTTTCTGGGGTTGGATTGGAGTGATGTGGAAATTCAAGTTTCATGTCTCCTACCAAATATGTCCATAGTTAACTGTGGAGTTTATGTGGAGAAGCAGCAAACCAACATGGAGAATAATGTGCAGTTCAAGTCTTCTGATGATGATCATCTGCTTTCCTTGAATGCTTCAAGAACTTCGTTGAATCGAAGAGCAATAACTTGTCCCCCTAATGAACCACCCAATAAGAAGCTCATGAGAAAGTTAAAGGCTCATGATAAAGAAAAGCTCAGCAACAAAATGAAAGGGACAAGGAGAATCAAACGACACCCAATTTTTCATTCTTGTCACAAGAGGAAGGTGTTTTTTCCAATGGGTAAGCATTTTGGGAGATTTTTGCATTATTAG	3000	0.3923	MLCAGRESMPSSMTRSLEKENKSHLHYSKPLRNRRFRLLCFLETMLLPRGASMNSPTSFSVRRKGTRWSCPSFTRWILWMFSIREITLGKPWLLLKIGSDMTWRKCKNGGSALSEAASLSSGWLFEDGYEPGFIERIVEHAYIMLPPKRLHNTDYMVGLKPRMEEVMSLLDESDDSISMLGIHGTGGIGKTTLAKAVYNSIFFQFEGACFLFDVREESRKYQGMVRLQQTLVSEILEEKMKKFGSVDEGITKIKHRLSNKKVLLVLDDVDEVEQLEQLAGGCDWFGCGSKVIITTRNKQLLISRSVQKTYEMKELNEHYSLELFCWHAFHMNQPPIDFENMSGCIISYVHGLPLALKLIGSNLAHKNLDEWRSTLEQYERSPERTIHGVLKISYDCLQDGAKQIFLDIACFFKKESLELIEDVEACDYGARFYIEVLVDKSLISIDDNGCLYMHDLIQQMGREIVRQEAPSSPGKRSRLWYYKDVLQVLQKNLKFEHVTHMDFSHCEFITEVPDMSQFQSLRRLLFQGCSNLIKVHDSVGSLSRVVKLDVSECGKLTSFPREINMISLEVLDLSKCRSLDYFPNIVGKMNAVTGIFATDTAIKELPPSIGNLPQLGYLDISSNKSLGELPNNLFTLQNVKDLELGGIQPHCTKSLNKLMQQNQSSFISCRNLELLDLRNCGLWDEDVRLTMKCFQNVKELNLSRNDFVSLPDCIKECAYLWRLELQNCKRLRNIPELPSSLRYIMAMNCSSLTTKSLGHLWSQAKDCFNVGIGMPAPATFPGWFDHFCKGHTLTFRVCGKIFPRVVIAIESGKVNTRGRHLFLISMSINGRKIQRTPSEEGPVFVFYGKQGHMFIFDLLQNFGAEELEGLNKFLGLDWSDVEIQVSCLLPNMSIVNCGVYVEKQQTNMENNVQFKSSDDDHLLSLNASRTSLNRRAITCPPNEPPNKKLMRKLKAHDKEKLSNKMKGTRRIKRHPIFHSCHKRKVFFPMGKHFGRFLHY	999

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g1992	999	MobiDBLite	consensus disorder prediction	1	21	-	-
	Prci11g1992	999	SUPERFAMILY	L domain-like	453	753	-	-
	Prci11g1992	999	Gene3D	-	145	310	IPR027417	-
	Prci11g1992	999	PRINTS	Disease resistance protein signature	179	194	-	-
	Prci11g1992	999	PRINTS	Disease resistance protein signature	349	363	-	-
	Prci11g1992	999	PRINTS	Disease resistance protein signature	256	270	-	-
	Prci11g1992	999	PRINTS	Disease resistance protein signature	563	579	-	-
	Prci11g1992	999	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	147	408	IPR027417	-
	Prci11g1992	999	Gene3D	Ribonuclease Inhibitor	595	767	IPR032675	-
	Prci11g1992	999	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	75	631	IPR044974	GO:0006952
	Prci11g1992	999	Gene3D	-	314	398	IPR042197	-
	Prci11g1992	999	Pfam	NB-ARC domain	162	384	IPR002182	GO:0043531
	Prci11g1992	999	Gene3D	Ribonuclease Inhibitor	483	594	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g1992	Prci-Chr11	17237154	17245513	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g1992	157	757	WRKY Transcription Factor Family	AT5G45050	29.222	2.19e-50	192

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g1992	-		-	pcin:129286213	921.383