Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1991 ATGGCAGCACCATCATCGGTTGGCTTCGCCGGCAAACCCAAGTACAGATATGATGTTTTTCTAAGTTTCAGAGGCGAAGATACTCGCCACTCCTTCACTGTGCATCTCTACGATGCTTTACGCCGGAAGGGAGTCAACGCCTTCATAGACGACAAGAAGCTTGGGAAAGGGGAGCGGATCTCACCAGCGCTTCTTAAAGCCATTGAGAAATCGAGGATTTCGATTATTGTGTTCTCTAAGAACTATGCTACTTCCACATGGTGCCTCGACGAACTCTCCCACATCATTCAGTGTAAGAAGGAGAAGAAACAGATGGTCATGCCAATATTTTATAATGTGGATCCGTTGGATGTTCAATTTCAGAGAAATAGCTTTGGAGAAGCCATGGCTGCTCTGGAAGATAGGTTCAGAGAGGACTTGGAGAAAGTGCAAAAATGGAGGTCTGCTTTGTCTGAAGCTGCTAGTTTGTCATCAGCATGGCTTTTGGAAGAAGAATATGAATGTGGGTTCATTGAAAAGATTGTTGAAGACGCATTTGCTATGTTACCTCCTAAACGTTTGCATAGCCGTGAGTGCATGGTCGGACTTGAGCCTCGCATAGAAAGGTTGAAGTCTCTTTTGGATCATTCTAATAATGGCGTCTGTATGGTGGGGATTTATGGAACCGGTGGAATTGGAAAAACAACCCTTGCAAAGGCTTTGTATAATTCAATTTTCTACCAATTTGAAGGTGCATGTTTTTTGTTTGATGTTAGAGAAGCATCAAAGAAATACCAGGGCATTGTTCATCTTCAACAGGCACTTATATCAGAGATTCTTGAGGAAAAGAAGACAAAGTTTAGCAGTGTTGATGAAGGAATATCTAGAATAAAACACAGACTCTCTCACAAAAGAGTTCTGTTGGTTCTTGATGATGTTGATGAGGTTGAACAGTTAGAAAAACTAGCAGGGGGGTGTGATTGGTTTGGTTGTGGCAGCAAGGTCATCATAACAACAAGAAATAAGCAGTTGCTAATTGTGCATAATGTTGAAAAAACATATGAAATGAAGAAGCTAGATGATCATGACTCTCTTGAACTGTTTTGTTGGCATGCATTCCATTTGATCCAGCCTCCAAAAGGCTATGAAAATATGTCCAAACGTGTGATAAGTTATGCAAATGGCCTTCCATTGGCTTTAAAATTAGTAGGCTCCAATTTGGCACATAAGAATTTAGAGGAATGGAGGTCTACGCTAGAACAATATGAGAGGATCATGGAAAGAACAATTCTAGACATACTAAAGATAAGCTATGATTGCTTGCAAGATGGTGCAAAGCGTATTTTTCTAGATATTGCTTGTTTCTTTAAAGAGGAGGCATTGGAAACTGTTGAAGAAAAACTAGCAGCTTATGATTTTGGTGCAAGGTTTTACATTGAAATTCTTGTTGACAAATCTCTTGTAACTGTTGCTGATAGTGGTAACCTGGGTATGCATGATCTAATACAGCAAATGGGTAGGGAGATTGTTAGGCAGGAGGCCCCATCAAATCCTTGTAAACGCAGTAGATTATGGCATTGCAAAGATGTTCTCGAAGTATTGCGTGAAAATCTAGGAAGCAGTAATATTGAAGGAATAATGCTTGATCCGCCTCAACAAGAAGAAGTGGAGTGGAGTGGTATGGCTTTTGAGAAGATGAGTAATCTTAGGATTCTTGTGGTTCGGAATTCCCAATTTTCAACCAGCCCAAAGTATTTTCCAAGTAGTTTAAGATTGCTTGATTGGGCGGGATATCCTTCTACAACTTTGCCACCAGATTTTTCTCCTAAAAAACTAGTTTTCATCAAATTATCTGGTAGACTTTTCAGACTGGAAGAGTCATTCAAGAGATTTGAATGTGTAACGTATATGAATTTCTCACACTGTAAATTCATAACTGAAGTACCTGATATGTCTCAATTTCAAAATTTAAGAAGATTGTTGTTCAAAAGGTGTCGCAATCTAATCAAAGTTCATGACTCAGTTGGATCTCTGTCTAAGCTGGTTGAATTAAATCTTAGTAGATGCACCAATCTTACAAGCTTTCCACATGAAATCAAGATGGCATCTCTTCAAAAGCTTCATCTCAGCTATTGCATGAGTCTTGACCGCTTCCCACATATAGTGGGAAAGATGGATGCACTGAGGACAATTTATGCAGAAGACACTGCAATTAAAGAGCTCCCACCTTCCATTGGAAATCTTCCGAGGCTTGAATCTTTAGTTATAAGCTCCCACAAAAGTCTTAGGGAGCTTCCAAGCAGCTTATTTAAGTTGCAAAACCTTAGTTGGCTTAATTTAAGAGGTATTCAACCTCCGAGCAGAAAATCTTTGAAGAAATCATTACAAGAGGACCAACCAGTTGTTAGCTGCTCAAACTTGACGATGTTGAATCTCGAAAATTGTTGCCTACTGCTTGAAGATCTTCACCTAGCTCTAAATTGTTTTTGGAATGTGAAAGAGTTAATTTTATCAGGGAGTGATTTTGTGTCCCTTCCTGAGTGCATTAAAGAGTGTGCTAATCTGCGGAATCTAGTATTGAATAACTGCAAGAGGCTAAGAGACATACCAGAGTTGCCATCAAAATTGGAAAATATAGAGGCTGAGAATTGCATATCATTATCTACAGGGTCATTAAGCCATTTATGGTCTCAGGCGAGAAAGGAGTTCCATCACTTGAACATTACTATGCCACCGACAACATTTCCTGATTGGTTCAACATATTCTGTAAAGGAGGGACATTGTCTTTTCGTGCTCATGGGAATTTCCCTCATGCTGCCTTTGCTTTTGAGTTGGGCAAAGCAAACTCGAGTGAGAAACACTTTGTCCATGTTTCCGTGAGCATCAATGGTCGTAAAACACAAAGGAGACAAAATGCTGCAAATTATGGAACTAGGGAAGGTCATCTGTTTTTATTTGATCTAAAAATGGCTTTTGAGCCAGAAGAGTGGGAGAGGCTTGATAGTTTTCTGGAACTGGATTGGAATGATGTGGAAATAGAAGTCCTATGTTTAACTCCCCACAAGAAAAAACAAGTCATAAAGTTAACACCAGAAATGCCCATAGTTAGCTGTGGAGTATATGTGTACAAACAGCAAACAAACATGGAGAATGTCCTTTTCCAGTCAGCTATGCTTTCCATGAATTCTCCTTCAACTTCACTGAAACGAAGAGCAACTGCTTCTCCTCCTAATGAACAGCCCATAAAGATCTTGAGAAAATTCAAGGCTGTTAATAAAGGAAACTCAACAACACAAAGAATGGGATAA 3288 0.396 MAAPSSVGFAGKPKYRYDVFLSFRGEDTRHSFTVHLYDALRRKGVNAFIDDKKLGKGERISPALLKAIEKSRISIIVFSKNYATSTWCLDELSHIIQCKKEKKQMVMPIFYNVDPLDVQFQRNSFGEAMAALEDRFREDLEKVQKWRSALSEAASLSSAWLLEEEYECGFIEKIVEDAFAMLPPKRLHSRECMVGLEPRIERLKSLLDHSNNGVCMVGIYGTGGIGKTTLAKALYNSIFYQFEGACFLFDVREASKKYQGIVHLQQALISEILEEKKTKFSSVDEGISRIKHRLSHKRVLLVLDDVDEVEQLEKLAGGCDWFGCGSKVIITTRNKQLLIVHNVEKTYEMKKLDDHDSLELFCWHAFHLIQPPKGYENMSKRVISYANGLPLALKLVGSNLAHKNLEEWRSTLEQYERIMERTILDILKISYDCLQDGAKRIFLDIACFFKEEALETVEEKLAAYDFGARFYIEILVDKSLVTVADSGNLGMHDLIQQMGREIVRQEAPSNPCKRSRLWHCKDVLEVLRENLGSSNIEGIMLDPPQQEEVEWSGMAFEKMSNLRILVVRNSQFSTSPKYFPSSLRLLDWAGYPSTTLPPDFSPKKLVFIKLSGRLFRLEESFKRFECVTYMNFSHCKFITEVPDMSQFQNLRRLLFKRCRNLIKVHDSVGSLSKLVELNLSRCTNLTSFPHEIKMASLQKLHLSYCMSLDRFPHIVGKMDALRTIYAEDTAIKELPPSIGNLPRLESLVISSHKSLRELPSSLFKLQNLSWLNLRGIQPPSRKSLKKSLQEDQPVVSCSNLTMLNLENCCLLLEDLHLALNCFWNVKELILSGSDFVSLPECIKECANLRNLVLNNCKRLRDIPELPSKLENIEAENCISLSTGSLSHLWSQARKEFHHLNITMPPTTFPDWFNIFCKGGTLSFRAHGNFPHAAFAFELGKANSSEKHFVHVSVSINGRKTQRRQNAANYGTREGHLFLFDLKMAFEPEEWERLDSFLELDWNDVEIEVLCLTPHKKKQVIKLTPEMPIVSCGVYVYKQQTNMENVLFQSAMLSMNSPSTSLKRRATASPPNEQPIKILRKFKAVNKGNSTTQRMG 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1991 1095 SUPERFAMILY L domain-like 541 890 - -
Prci11g1991 1095 Gene3D - 185 346 IPR027417 -
Prci11g1991 1095 ProSiteProfiles NACHT-NTPase domain profile. 215 309 IPR007111 -
Prci11g1991 1095 Pfam NB-ARC domain 199 417 IPR002182 GO:0043531
Prci11g1991 1095 SUPERFAMILY "Winged helix" DNA-binding domain 422 527 IPR036390 -
Prci11g1991 1095 SMART till_3 16 156 IPR000157 GO:0007165
Prci11g1991 1095 PRINTS Disease resistance protein signature 386 400 - -
Prci11g1991 1095 PRINTS Disease resistance protein signature 669 685 - -
Prci11g1991 1095 PRINTS Disease resistance protein signature 216 231 - -
Prci11g1991 1095 PRINTS Disease resistance protein signature 293 307 - -
Prci11g1991 1095 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 760 IPR044974 GO:0006952
Prci11g1991 1095 Gene3D Ribonuclease Inhibitor 710 901 IPR032675 -
Prci11g1991 1095 Gene3D - 351 435 IPR042197 -
Prci11g1991 1095 Gene3D Ribonuclease Inhibitor 522 709 IPR032675 -
Prci11g1991 1095 Pfam TIR domain 17 178 IPR000157 GO:0007165
Prci11g1991 1095 Coils Coil 405 425 - -
Prci11g1991 1095 ProSiteProfiles TIR domain profile. 15 182 IPR000157 GO:0007165
Prci11g1991 1095 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Prci11g1991 1095 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 156 IPR035897 -
Prci11g1991 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 445 IPR027417 -
Prci11g1991 1095 Gene3D - 11 184 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1991 Prci-Chr11 17232401 17240092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1991 17 775 WRKY Transcription Factor Family AT4G12020 31.789 3.84e-98 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1991 - - pcin:129284776 1340.87