Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1985 ATGGCGATTCAAGTAGCCTCATCATCATCCTTCAGCTTCACCAGAACCAAGTACAGATATGAATATGACATTTTTCTGAGTTTCAGAGGCGAAGATACTCGCCACTCCTTCACTGAAATTCTCTATGATGCTTTGCGACGTAAGGGAATCAACGCCTTCATTGACGACAAGAAGCTTGGCAAAGGGGAAGAGATCTCTCCAACGCTTCTCAAAGCCATAGAGAGATCCAGAATTTCCATTATTGTCTTCTCTACCAACTATGCTACTTCCACCTGGTGCCTCGAGGAACTCGCCCACATCGTTTGGTGTAGGAAGCAGAAGAACCAGGCGGTGATGCCCATCTTTTACAAGGTGGATCCATTGGATGTTCAGTATCAGAGAAATAGCTTTGAGGAAGCCATGGCTGCTCTTGAAGATAGGTTCAGAGATGACTTAGAGAAAGTGCGAAAATGGAGGTCTGCTTTGTCTGAAGCTGCTAGCTTGTCATCAGCATGGCTTTTCGAAGATGGGTACGAGTTGGGATTTATTGAAAAGATAGTCGAAGATGCGTATGCTATGCTGCCACCAAAGCGCTTCCATAACACTGATCATTTGGTTGGACTTGAACCTCGTATTGAGGAGTTGATGTCACTTCTGAATAAGTCTAATGATCGTGTTTGTATGTTGGGGATTCATGGAACTGGTGGGGTTGGCAAAACAACCATTGCGAAAGCTATCTATAATTCAATCTTTTACCATTTTGAAGGTTCGTGTTTTTTGTTTGATGTCAAAGAAGCATCAAACAAATATCAGGGCATTGTTCGCCTTCAGGAGACACTTTTATCAGAGATTGTTGAAGAGAAGAGGATGAAGTTTGGTAGTATTGATGAAGGAATCTCAAACATAAAGCACAGACTCTCTCAGAAAAAGGTTTTGTTGGTTCTTGATGATGTTGATGAGGTTGAACAATTAGAACAACTCGCTGGAGGTTGCGATTGGTTTGGATCTGGAAGCAAGATCATTATAACTACAAGAAATAAGCAGTTGCTAATTGCATGTAATGTTAGAGAAACATATGAAATGAAGAAGCTAGACTGGCTTTACTCTCTTGAACTTTTTTGTTGGCATGCCTTTGGTACGAGCCAACCTAGGAAAGGCTATAAAGACATGTCCATTCATGTTATAAGGTATGCGAGTGGCCTTCCTTTGGCTTTAAAATTAATAGGCTCCAATTTGACAAATAAAAGCATTAAGGAATGGAGATCTATATTGAAGCAATATGATGAGATCCCAGAAGGAGCAATTCATCATGTATTGAAGATAAGCTATGATTTTTTGCAAGACGGTGCTAAGCGTGTCTTTTTAGATATTGCTTGTTTCTTTAAAGAGAAGAAATTGGAATTTGTTGAAGCAATACTAGAAGCTTGTCATTGTGGAGCAAGGTTTTATATTGAAGTTCTTGTTGATAAATCTCTGATAACTATTCGTCGTAATGGTTACTTGGACATGCATGGTCTAATACAACATATGGGTAGAGAGATTGTTAGGAAAGAAGCACCATATGATCCTGGTAAACGTAGCAGATTATGGTATAACAAAGATGTTCTCAAAGTATTGTGTGAAAATTTAGGAAGCAGTAATATTGAAGGAATAATTCTCGATCCACCTCAACAAGAAGAAGTGGAGTGGAGTGGTTTAGCATTTGAGAAGATGAATAATCTTAAAATTCTCATTGTTCGCAATACCAAATTTTTAACAAGTCCAAAATATCTTCCAAATAGTTTAGTGTTACTTGATTGGCAGGAATATCCTTCAATGACATTGCCACAGGATTTTTCTCCTCCAAAGTTAATCTGCTTCAAGATATATGGAAGCCCTTTCAGATTGGTGGAACCATTCAAGAAGTTTGAATATGTGACATACATGGATTTCTCAAGGTGTAAATTCATAACTGAAGTACCTGACATGTCTCGGTTTCAAAATTTAAAAACATTAAGCTTTAGTGAATGTCACAATCTGATCAAAGTTCATGATTCAGTGGGATCTCTATGTAAGCTTGTTGAATTAGATGTTAGCGAATGCATCAAACTTGCAAGTTTTCCACATGAAATCAAGATGCCATCTCTTGAAGTTCTTAATATCAATGATTGCAAGAGTCTTGACTACTTCCCACACATCGTGGGAAACATGGATTCCCTCATGTATATTTATGCAGATGGCAGTGCTATTAATGAGATGCCATCTTCCATTGGAAGTCTTCCAAGGCTTGACAGTCTATATTTAAGATCCTGCAAAAGTCTTGAGGAGCTTCCAGACAGCTTATTGACATTGCATAATCTTAGAGTGATTCTGTTAGGAGGTCTAAAACCTCATGGGAGAAAATCTTTGAAGAAAGTATTGCAAGAGAGCCAGCTAACAATTATGAGCTTCTCGAAGTTAGCTCGCCTAGATCTCCACGATTGTGGTCTTTTGGATGAAGATCTTGACCTAACTCTGAAATGTTTCAAGAATGTGAGAGACTTGAATCTATCATGGAATGATTTTGTGTCACTTCCTGGGTGTATTAAGGAGTGTGTTCATTTGTGGAGACTAATAGTGGGTAACTGCAAGAGACTTAGAGATATACCAGAGCTGCCATCAAGTTTAGGGGACATAATGGCAAATAATTGCACATCATTAACCTTGGAGTCTTCAGGCCGTTTATGGTCTCAGGCAAAAAAGAGCTTTGGTGTGGGAATCGTTATGCCAGAAACAACATTTCCTGATTGGTTAGACCATTGCTGTAAAGGAGCAAAATTGTCTTTTCGTGTTCGTGGAAATTTCCCTCGTGTCGTCGTCGCATACGAGACGGGGAAAGCAAACACAAGGATGGAATTTTACTCGTTGGAAGTTTTTATGAGCATCAATGGTCGCAATAAAATGTCATGGGTACAAAGTGATCGTGATGCAAGGGAAAGGGGTCGTATCTTGTTGTCTTTTGGTGGTCAAGGTCATGTGTTTTTGTATGATCTGCTTAGTGATTTCAGGGAAGAAGAGTTGGAAGGGCTCAATAAGTTTCTGGATTTGGATTGGAATGACGTGGACATACAAGTTACATGTCAACCACCTGATCTATCCATAGTGAACTGTGGTATTTATGTCGATAAGCAACAAACTAACATGGAGAATATCCAGTTCAAGTCTCCTCTGCTTTCCATGGATACTTCAAAAACTTCACTGAAACGAAAAGCTATAGCTTCTCATCCTAAGGAACCACCCAAGAAGAACTTGAGAAGGTTCAAAGAAAGGACAAGGAAAACTAAACGACGCCAAAATTTTCGTTCGCAGCACAAGAGAAAGATGTTTTTTCCTATGGCTAAGCATCTTTGGAGAGCTTTGTACTCTTAG 3366 0.3928 MAIQVASSSSFSFTRTKYRYEYDIFLSFRGEDTRHSFTEILYDALRRKGINAFIDDKKLGKGEEISPTLLKAIERSRISIIVFSTNYATSTWCLEELAHIVWCRKQKNQAVMPIFYKVDPLDVQYQRNSFEEAMAALEDRFRDDLEKVRKWRSALSEAASLSSAWLFEDGYELGFIEKIVEDAYAMLPPKRFHNTDHLVGLEPRIEELMSLLNKSNDRVCMLGIHGTGGVGKTTIAKAIYNSIFYHFEGSCFLFDVKEASNKYQGIVRLQETLLSEIVEEKRMKFGSIDEGISNIKHRLSQKKVLLVLDDVDEVEQLEQLAGGCDWFGSGSKIIITTRNKQLLIACNVRETYEMKKLDWLYSLELFCWHAFGTSQPRKGYKDMSIHVIRYASGLPLALKLIGSNLTNKSIKEWRSILKQYDEIPEGAIHHVLKISYDFLQDGAKRVFLDIACFFKEKKLEFVEAILEACHCGARFYIEVLVDKSLITIRRNGYLDMHGLIQHMGREIVRKEAPYDPGKRSRLWYNKDVLKVLCENLGSSNIEGIILDPPQQEEVEWSGLAFEKMNNLKILIVRNTKFLTSPKYLPNSLVLLDWQEYPSMTLPQDFSPPKLICFKIYGSPFRLVEPFKKFEYVTYMDFSRCKFITEVPDMSRFQNLKTLSFSECHNLIKVHDSVGSLCKLVELDVSECIKLASFPHEIKMPSLEVLNINDCKSLDYFPHIVGNMDSLMYIYADGSAINEMPSSIGSLPRLDSLYLRSCKSLEELPDSLLTLHNLRVILLGGLKPHGRKSLKKVLQESQLTIMSFSKLARLDLHDCGLLDEDLDLTLKCFKNVRDLNLSWNDFVSLPGCIKECVHLWRLIVGNCKRLRDIPELPSSLGDIMANNCTSLTLESSGRLWSQAKKSFGVGIVMPETTFPDWLDHCCKGAKLSFRVRGNFPRVVVAYETGKANTRMEFYSLEVFMSINGRNKMSWVQSDRDARERGRILLSFGGQGHVFLYDLLSDFREEELEGLNKFLDLDWNDVDIQVTCQPPDLSIVNCGIYVDKQQTNMENIQFKSPLLSMDTSKTSLKRKAIASHPKEPPKKNLRRFKERTRKTKRRQNFRSQHKRKMFFPMAKHLWRALYS 1121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1985 1121 Gene3D - 190 352 IPR027417 -
Prci11g1985 1121 Gene3D - 359 440 IPR042197 -
Prci11g1985 1121 MobiDBLite consensus disorder prediction 1085 1100 - -
Prci11g1985 1121 Gene3D - 16 189 IPR035897 -
Prci11g1985 1121 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 188 - -
Prci11g1985 1121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 450 IPR027417 -
Prci11g1985 1121 MobiDBLite consensus disorder prediction 1069 1100 - -
Prci11g1985 1121 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 161 IPR035897 -
Prci11g1985 1121 MobiDBLite consensus disorder prediction 1070 1084 - -
Prci11g1985 1121 SUPERFAMILY "Winged helix" DNA-binding domain 427 532 IPR036390 -
Prci11g1985 1121 Pfam NB-ARC domain 204 425 IPR002182 GO:0043531
Prci11g1985 1121 SUPERFAMILY L domain-like 510 890 - -
Prci11g1985 1121 Pfam TIR domain 22 182 IPR000157 GO:0007165
Prci11g1985 1121 Gene3D Ribonuclease Inhibitor 716 894 IPR032675 -
Prci11g1985 1121 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 802 IPR044974 GO:0006952
Prci11g1985 1121 ProSiteProfiles TIR domain profile. 20 187 IPR000157 GO:0007165
Prci11g1985 1121 Gene3D Ribonuclease Inhibitor 532 715 IPR032675 -
Prci11g1985 1121 PRINTS Disease resistance protein signature 391 405 - -
Prci11g1985 1121 PRINTS Disease resistance protein signature 697 713 - -
Prci11g1985 1121 PRINTS Disease resistance protein signature 221 236 - -
Prci11g1985 1121 PRINTS Disease resistance protein signature 298 312 - -
Prci11g1985 1121 SMART till_3 21 161 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1985 Prci-Chr11 17150768 17155719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1985 13 813 WRKY Transcription Factor Family AT4G12020 30.816 1.24e-93 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1985 - - pcin:129284776 1459.12