Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1981 ATGGCGATTCCAGTGGCCTCACCTTCTTCATCCTTCAGCTTCACTAGCGAAACCAAGTTTAGATATGAATATGATGTTTTTCTGAGTTTCAGAGGCGAGGATACTCGCCGCTCCTTCACTGAAATTCTCTACGATGCTTTGCGACGTAAGGGAATCAACGCCTTCATTGATGACAAGAAGCTTGGAAAAGGGGAAGAGATCTCTCCTACGCTTCTCAAAGCCATAGAGAGGTCCAGAATTTCCATTATTGTCTTCTCTACCAATTACGCTACTTCTACATGGTGCCTAGACGAACTCGCCCACATCGTCCGGTGTATGAAGGAGAAGAAGCAGGTGGTGATGCCCATCTTTTACAAGGTGGATCCGATGGATGTTCAGTATCAGAGAAATAGCTTTGAGGAAGCCGTGGCTGCTCTTGAAGATAGATTCAGCGATGACCTGGAGAAAGTGCGAAAATGGAGGTCTGCTTTGTCTGAAGCTGCTAGCTTGTCGTCAGCATGGCTTTTTGATGATGGGTACGAGCTTGGATTCATTGAAAGGATTGTCGAAGATGCGTATGCCGTGCTACCACCTAAGCGCTGCCATAAAACTGATCATATAGTTGGACTTGAGCCTCGTATTGAGGAGATAATGTTACTTCTGAACAGATCTGATGATCGGGTTTGTATGTTGGGGATTCATGGAACTGGTGGGGTTGGCAAAACAACGATTGCAAAAGCCATCTATAATTCGATCTTCTACCAATTTGAAGGCTCGTGTTTTTTGTTTGATGTCAAAGAAACATCAAACAAGTATCAGGGCATTGTTCGCCTTCAACAGACACTTTTATCAGAGATTCTTGAAGAGAAGAGGATGAAGTTTGGTAGTGTTGATGAAGGAATATCAAACATAAAACACAGACTCTCTGGCAAAAAGGTTTTGTTGGTTCTTGACGATGTTGATGAGGTTGAACAATTAGAACAACTCGCTGGCAGTTGCGATTGGTTTGGATCTGGAAGCAAGATCATTATAACAACAAGAAATAAGCAATTACTAATAGCATGTAATGTTAAAAGAACATATGAAATGAAGGAGCTAAATTACCTTCACTCCATTGAACTTTTTTGCTGGTATGCCTTTGGTTTGAGCCAACCTAAGAGACGCTATAAAGGCATGTCAATTCATGTTATAAGAGACATTGCTAAAGAAGAAGCACCATGTGATCCTAGTGAATGCAGCAGATTATGGTATCACAAAGATGTTCTCAAAGTACTGCGTGAAAACTTAGGAGGAAATAATATTGAAGGAATAGTTCTTGATCCACCTCAACAAGAAGAAGTGGAGTGGAGTGGTTTAGCCTTTGAGAAGATGAATAATCTTAGAATTCTTATTGTTCGCAATACCAAATTTTCAGCAAGCCCTAAATATCTTCCAAATAGTTTAGTATTACTTGATTGGCAGGAATATCCTTCCATGACTTTACCACGTGATTTTTGTCCTCCAAAACTAATTTGCTTCAAGATATACGGAAGCCCTTTTAGATGGGAGGAACCACTCAAGCTTGAATATGTGACATATATGGATTTCTCGAAGTGTGAATTCATAACAGAAGTACCTGAGTTGTCTCGATTTCAAAATTTGAAAGAATTGAGCTTTAGTGAATGTCACAATCTGATCAAAGTCCATGATTCAGTAGGATCTCTCCGTAAGCTTGTCGAATTAGACGTTAGCAAATGCATCAAACTTGCAAGCTTTCCACATGAAATCAAGATGCCATCTCTTGAAGTTCTTAATCTCATTGATTGCCAGAGTCTTGACTACTTCCCACACATTGTGGGAAACATGGAACCATTGATGTGTATTCTTGCAGATGGTAGTGCTATTAATGAGCTCCCATCTTCCATTGGAAATCTTCCAAGGCTTGAGGTTTTGAGTTTAACATCCTGCAAAAGTCTTAGGAAGCTTCCAAACAGCTTATTGACATTGCATAATCTTAAAGGGCTTAAATTAGGAGGTCTGAAACTTCATGGGAGAAAATCTTTGAAGAAATTATTGCAAGAGAACCAACCACCAATTATGAGCTGCTCGAAGTTAGATCGCTTGGATCTCCATGATTGTGGTTTGTTGGATGAAGATCTTCACCTACCTCTGAAATGTTTTAAGCATGTGAAAGACTTGATTCTATCATGGAACGATTTTGTGTCACTTCCTGAGTGTATTAAAGAGTGTGTTCACTTGATGAACCTAGAAGTGAATAACTGCAAGAGACTCAGAGATATTCCAGAGCTTCCATCAAGATTAGGGGACATAAGGGCAGAGAATTGCACATCATTAACTATGGAGTCTTCGGGCCGTTTATGGTCTCAGGCCATAAAGTCCAATCGCGTGACCATCTCGATGCCAGCAACAGCATATCCTGACTGGTTCGACCATCGCTGTCAAGGAGGGATGTTGTCTTTTCGTGTTCATGGCAGAAATTTCCCTCGTGTTGTCATCGCATTTGAGACAGGGAAGGCTAACAGAAATAAGACATGCTACTTTGATGTCTTTATGATCATCAATGGCAGTAGCAAAATGCCATGGATGCAAATTGATTTTCCAATTCTAGGTGAAGGAGGTCGTGTTTTGGTTTCTTATACTGAACAAGGTCATGTGTTTTTCTCTGATCTCCTCGGCGAATTTACAGAAGAAGAGTTAGGGGGGCTTAATAAATTTCTGGAATTGGATTGGAATGACGTGGAAATTCAAGTTACATGTGACTCAGATGATATAGACATAGTTAACTGTGGAGTTTATGTCGACAAGAAGCAAACAAACATGAAGAATGTCCAGTTCAAGTCTTCTAGAACTTCACAGAAACGAAGAGCGATAGCTTCTCTTCCTTCTGAACCACCCAAGAAGCTCCTGAGAAAGTTCAAGACTACTTCCAAAAGAAATATCAACAACACAAAGAAAAGGACAAGGAGAACTAAACCACAGCATTTTCATCCGTGGTACAGGAGGAGAAAGATGTTTTTTCCAATGGGTAAGAATCCCTTGAGGTTTGTGTATCATTATTAG 3039 0.4041 MAIPVASPSSSFSFTSETKFRYEYDVFLSFRGEDTRRSFTEILYDALRRKGINAFIDDKKLGKGEEISPTLLKAIERSRISIIVFSTNYATSTWCLDELAHIVRCMKEKKQVVMPIFYKVDPMDVQYQRNSFEEAVAALEDRFSDDLEKVRKWRSALSEAASLSSAWLFDDGYELGFIERIVEDAYAVLPPKRCHKTDHIVGLEPRIEEIMLLLNRSDDRVCMLGIHGTGGVGKTTIAKAIYNSIFYQFEGSCFLFDVKETSNKYQGIVRLQQTLLSEILEEKRMKFGSVDEGISNIKHRLSGKKVLLVLDDVDEVEQLEQLAGSCDWFGSGSKIIITTRNKQLLIACNVKRTYEMKELNYLHSIELFCWYAFGLSQPKRRYKGMSIHVIRDIAKEEAPCDPSECSRLWYHKDVLKVLRENLGGNNIEGIVLDPPQQEEVEWSGLAFEKMNNLRILIVRNTKFSASPKYLPNSLVLLDWQEYPSMTLPRDFCPPKLICFKIYGSPFRWEEPLKLEYVTYMDFSKCEFITEVPELSRFQNLKELSFSECHNLIKVHDSVGSLRKLVELDVSKCIKLASFPHEIKMPSLEVLNLIDCQSLDYFPHIVGNMEPLMCILADGSAINELPSSIGNLPRLEVLSLTSCKSLRKLPNSLLTLHNLKGLKLGGLKLHGRKSLKKLLQENQPPIMSCSKLDRLDLHDCGLLDEDLHLPLKCFKHVKDLILSWNDFVSLPECIKECVHLMNLEVNNCKRLRDIPELPSRLGDIRAENCTSLTMESSGRLWSQAIKSNRVTISMPATAYPDWFDHRCQGGMLSFRVHGRNFPRVVIAFETGKANRNKTCYFDVFMIINGSSKMPWMQIDFPILGEGGRVLVSYTEQGHVFFSDLLGEFTEEELGGLNKFLELDWNDVEIQVTCDSDDIDIVNCGVYVDKKQTNMKNVQFKSSRTSQKRRAIASLPSEPPKKLLRKFKTTSKRNINNTKKRTRRTKPQHFHPWYRRRKMFFPMGKNPLRFVYHY 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1981 1012 FunFam Disease resistance protein (TIR-NBS-LRR class) 21 190 - -
Prci11g1981 1012 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 382 IPR027417 -
Prci11g1981 1012 Pfam NB-ARC domain 206 378 IPR002182 GO:0043531
Prci11g1981 1012 PRINTS Disease resistance protein signature 223 238 - -
Prci11g1981 1012 PRINTS Disease resistance protein signature 629 645 - -
Prci11g1981 1012 PRINTS Disease resistance protein signature 300 314 - -
Prci11g1981 1012 Pfam TIR domain 24 169 IPR000157 GO:0007165
Prci11g1981 1012 Gene3D Ribonuclease Inhibitor 615 783 IPR032675 -
Prci11g1981 1012 Gene3D Ribonuclease Inhibitor 415 614 IPR032675 -
Prci11g1981 1012 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 163 IPR035897 -
Prci11g1981 1012 ProSiteProfiles TIR domain profile. 22 189 IPR000157 GO:0007165
Prci11g1981 1012 SUPERFAMILY L domain-like 430 776 - -
Prci11g1981 1012 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 383 IPR044974 GO:0006952
Prci11g1981 1012 Gene3D - 18 191 IPR035897 -
Prci11g1981 1012 Gene3D - 192 354 IPR027417 -
Prci11g1981 1012 SMART till_3 23 163 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1981 Prci-Chr11 17126286 17132971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1981 391 665 WRKY Transcription Factor Family AT4G12020 34.130 1.32e-31 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1981 - - pcin:129284776 702.205