Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1979 ATGGCGATTCAAGTGGCCTCACCATCGTCCTTCAGCTTCACCAGTGAAACCAGCAGGTATAGATATGAATATGATGTTTTTCTGAGTTTCAGAGGCGAAGATACTCGAAACTCCTTCACCGTGCCTCTCTACAATGCTTTGCGCCGTAAGGGAATCAACGCCTTCATTGACGACAAGAGACTTGGCAAAGGGGAAGAGATCTCTCCTACGCTTCTCAAAGCCATAGAGAGATCCAGGATTTCCATTATTGTCTTCTCTACCAACTACGCTACTTCCACATGGTGCCTCGAGGAACTCGCCCACATCGTTTGGTGTAGGAAGCAGAAGAACCAGCTGGTGATGCCGATCTTCTACAAGGTGGATCCGTTGGATGTTCAGTATCAGAGAAATAGCTTTGAGGAAGCCATGGCTGCTCATGAAGTTAGGTTCAGAGATGACTTACAGAAAGTGCGAAACTGGAGGTCTGCTCTGTCTGAAGCTGCGAGCTTATCATCAGCATGGCTTTTTGACGATGGGTATGAGTTGGGATTTATTGAAAGGATTGTCGAAGATGCATATACTTTGCTGCCTCCTAAGCGCTACCATAACACTGATCATATGGTTGGACTTGAGCCTCGTATTGAGGAGGTGATGTCACTTCTAAATAAATCTGATGATCGTGTTTGTATGTTCGGGATTCATGGAACTGGTGGAGTTGGCAAAACAACGATTGCCAAAGCTATCTATAATTCAATCTTTTACCAATTTGAAGGTTCATGTTTTTTGTTTGATGTGAAAGAAGCATCAAAGAAGTATCAGGGCATAGTTCGCCTTCAACAGACACTTTTATCGGAGATTCTTGAAGAGAAGAAGATGAAGTTTGGTAGTGTTGATGAAGGAATCTCAAACATAAAACACAGACTCTCTTGCAAAAAGGTCTTGTTGGTTCTTGATGATGTGGATGAGGTTGAACAATTAGAACAACTTTCTGGCGGGTGCGATTGGTTTGGATCTGGAAGCAAGATCATTATAACAACAAGAAATAAGCAATTGCTAATTTCATGTAATGTTAAAATAACATATGAAATGAAGAAGCTAAATCAGCTTTACTCTCTTGAACTTTTTTGCTGGTTTGCCTTTGGTACCAGCCAACCTAAGAAAGGCTATAAAAACATGTCGATTCATGTTATAAGGTATGTGCATGGTCTTCCTCTGGCTTTAAAATTAATAGGCTCCAATTTGGCAAATAAAAGCATTGAGGAATGGAGATCTATATTGAAGCAATACGATGAGATCCCAGAAGGAACAATTCATCATGTATTGAAGATAAGCTATGACTGCTTACAAGACGGTGCTAAGCATATCTTCTTAGATATTGCTTGTTTCTTTAAGGAGGAGAAATTTGAATACGTTGAAGCAATACTGGAAGCTTGTCATAGTGGGGCAAGGTTTTATATTGAAGTTCTTGTTGATAAATCTCTGATAACTGTTCTTGATAATGGTTACTTGTACATGCACGATCTAGTACAGCATATGGGTAGAGAGATAGTTAGGCAAAAAGCACCATATGATCCAGGTGAACGCGGCAGATTATGGTATCACAAAGATGTTCTCAAAGTATTGCGTGAAAATTTAGGAGGCAGGAATATTGAAGGAATAATTCTTGATCCACCTCAGCAAGAAGAAGTGGAGTGGAATGGTTTAGCATTTGAAAAGATGATTAATCTTAGAATTCTTATTGTTCGCAATACCCAATTTTCAGCAAGTCCAAAATATCTTCCAAATAGTTTAGTCTTACTTGATTGGCAGGGATATCCTTCCAAGACTTTACCACTAGACTTTTCTCCCCGAAAACTAATTTGCTTCAAGATATCCGGAAGTCCTTTCAGATTGGAGGACCCATTCAAGAAGTTTGAATATGTGACATATATGGATTTCTCGAAGTGTGAATTCATAACAGAAGTACCTGAGATGTCTCGATTTCAAAATTTGAAAGAATTGAGCTTTAGTGAATGTCACAATCTGATCAAAGTTCATGATTCAGTAGGATCTCTACGTAAGCTTGTCGAATTAGACGTTAGCAAATGCATCAAACTTGCAAGCTTTCCACATGAAATCAAGATGCCATCTCTTCAAGTTCTTAATCTCAATGATTGCAAGAGTCTTGACGACTTCCCACACATTGTGGGAAAAATGGATCAACTGATGTATATTTATGCAGAAGGCACTGCAATTAATGAGCTCCCATCTTCAATTGGAAATCTTCCAAGGCTTGACATTTTGAGTTTAAGATCCTGCAAAAGTCTTAGGGAGCTTCCAAACAGTTTATTGACATTGCATAATCTTGGAGTGCTTCTATTAGGAGGTCTAAAACCTCATGGGAGAAAATCTTTGAAGAAATTATTGCAAGAGAGCCAACCATCAATTGTTAGCTGCACGAAATTAGATCGCCTGGATCTCCATAATTGTGGTCTGTTGGATGAGGATCTTCACCTAACTCTGAAATGTTTTCAGAATGTGAGAGACTTGAATCTGTCAGGGAATGATTTAGTGTCATTTCCTGAGTGTATTAAGGAGTGTGTTCATTTGTGGAAACTAGAAGTGAGTAACTGCAAGAGACTCAGAGATATTACAGAGCTTCCATCAAGTTTAGGGGACATAACGGCAGAGAATTGCACATCATTAACCGTGGAGTCTTCAGGCCATTTGTGGTCTCAGGCCACGAAGTGCCATCGCATGGCAATCTGGATGCCAGCAACAACATATCCTGATTGGTTCAACCATTGCTGTCAAGGAGGGACGTTGTCTTTTCGTGTTCATGGCAGAAATTTCCCTCGTGTTGTCATCGCATTTGAGACAGGGAAGACTAATATAAATAAGAGATACAGTTTTCAGGTGTTCATGAACATCAATGGCAGTAGCAAAATGCCATGGATGCAAAGTGATTTTCCAATCGAAGCTGAAGGAGGTCGTGTTTTGGTTTCTCTTGGTAAACAAGGTCATGTGTTTTTCTCTGATCTACTCGGCGAATTTTCAGAACAAGAGTTAGAGGGGCTTAATAAGTCTCTGGAATTGGATTGGAACGATGTGGAAATTCAAGTTACATGTCGTACAGATGATATAGACATAGTTAATTGTGGAGTTTATGTCGACAAGCAGCAAACAGACATGGAGAATGTCCAGTTCACGTCTTCTAGAACTTCACTGAAACGAAGAGCGATAGCTTCTGTTCCTAACGAACCACCCAAGAAGCTCCTGAGAAAGTCCAAGGCTAGTGATAAAAGAAACATCAATAACACAAAGAAAAGGACAAGGAGGAGAAAGATGTTTTTACCAATGGGTAAGATTCTCTGGAGATTTTTGTATCCTTAG 3351 0.3993 MAIQVASPSSFSFTSETSRYRYEYDVFLSFRGEDTRNSFTVPLYNALRRKGINAFIDDKRLGKGEEISPTLLKAIERSRISIIVFSTNYATSTWCLEELAHIVWCRKQKNQLVMPIFYKVDPLDVQYQRNSFEEAMAAHEVRFRDDLQKVRNWRSALSEAASLSSAWLFDDGYELGFIERIVEDAYTLLPPKRYHNTDHMVGLEPRIEEVMSLLNKSDDRVCMFGIHGTGGVGKTTIAKAIYNSIFYQFEGSCFLFDVKEASKKYQGIVRLQQTLLSEILEEKKMKFGSVDEGISNIKHRLSCKKVLLVLDDVDEVEQLEQLSGGCDWFGSGSKIIITTRNKQLLISCNVKITYEMKKLNQLYSLELFCWFAFGTSQPKKGYKNMSIHVIRYVHGLPLALKLIGSNLANKSIEEWRSILKQYDEIPEGTIHHVLKISYDCLQDGAKHIFLDIACFFKEEKFEYVEAILEACHSGARFYIEVLVDKSLITVLDNGYLYMHDLVQHMGREIVRQKAPYDPGERGRLWYHKDVLKVLRENLGGRNIEGIILDPPQQEEVEWNGLAFEKMINLRILIVRNTQFSASPKYLPNSLVLLDWQGYPSKTLPLDFSPRKLICFKISGSPFRLEDPFKKFEYVTYMDFSKCEFITEVPEMSRFQNLKELSFSECHNLIKVHDSVGSLRKLVELDVSKCIKLASFPHEIKMPSLQVLNLNDCKSLDDFPHIVGKMDQLMYIYAEGTAINELPSSIGNLPRLDILSLRSCKSLRELPNSLLTLHNLGVLLLGGLKPHGRKSLKKLLQESQPSIVSCTKLDRLDLHNCGLLDEDLHLTLKCFQNVRDLNLSGNDLVSFPECIKECVHLWKLEVSNCKRLRDITELPSSLGDITAENCTSLTVESSGHLWSQATKCHRMAIWMPATTYPDWFNHCCQGGTLSFRVHGRNFPRVVIAFETGKTNINKRYSFQVFMNINGSSKMPWMQSDFPIEAEGGRVLVSLGKQGHVFFSDLLGEFSEQELEGLNKSLELDWNDVEIQVTCRTDDIDIVNCGVYVDKQQTDMENVQFTSSRTSLKRRAIASVPNEPPKKLLRKSKASDKRNINNTKKRTRRRKMFLPMGKILWRFLYP 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1979 1116 PRINTS Disease resistance protein signature 223 238 - -
Prci11g1979 1116 PRINTS Disease resistance protein signature 699 715 - -
Prci11g1979 1116 PRINTS Disease resistance protein signature 393 407 - -
Prci11g1979 1116 PRINTS Disease resistance protein signature 300 314 - -
Prci11g1979 1116 MobiDBLite consensus disorder prediction 1076 1098 - -
Prci11g1979 1116 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 769 IPR044974 GO:0006952
Prci11g1979 1116 Gene3D Ribonuclease Inhibitor 555 724 IPR032675 -
Prci11g1979 1116 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 163 IPR035897 -
Prci11g1979 1116 Gene3D - 18 190 IPR035897 -
Prci11g1979 1116 Pfam NB-ARC domain 206 428 IPR002182 GO:0043531
Prci11g1979 1116 SMART till_3 23 163 IPR000157 GO:0007165
Prci11g1979 1116 SUPERFAMILY L domain-like 548 892 - -
Prci11g1979 1116 Gene3D - 191 353 IPR027417 -
Prci11g1979 1116 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 190 - -
Prci11g1979 1116 Pfam TIR domain 24 169 IPR000157 GO:0007165
Prci11g1979 1116 Gene3D - 358 442 IPR042197 -
Prci11g1979 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 452 IPR027417 -
Prci11g1979 1116 ProSiteProfiles TIR domain profile. 22 189 IPR000157 GO:0007165
Prci11g1979 1116 Gene3D Ribonuclease Inhibitor 725 892 IPR032675 -
Prci11g1979 1116 SUPERFAMILY "Winged helix" DNA-binding domain 429 534 IPR036390 -
Prci11g1979 1116 MobiDBLite consensus disorder prediction 1076 1091 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1979 Prci-Chr11 17099280 17110869 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1979 23 782 WRKY Transcription Factor Family AT4G12020 31.969 1.29e-92 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1979 - - pcin:129284776 1487.24