Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1976 ATGGCGATTCAAGTGGCCTCACCATCGTCCTTCAGCTTCACCAGTGAAACCAGCAGGTATAGATATGAATATGATGTTTTTCTGAGTTTCAGAGGCGAAGATACTCGAAACTCCTTCACCGTGCCTCTCTACAATGCTTTGCGCCGTAAGGGAATCAACGCCTTCATTGACGACAAGAGACTTGGCAAAGGGGAAGAGATCTCTCCTACGCTTCTCAAAGCCATAGAGAGATCCAGGATTTCCATTATTGTCTTCTCTACCAACTACGCTACTTCCACATGGTGCCTCGAGGAACTCGCCCACATCGTTTGGTGTAGGAAGCAGAAGAACCAGCTGGTGATGCCGATCTTCTACAAGGTGGATCCGTTGGATGTTCAGTATCAGAGAAATAGCTTTGAGGAAGCCATGGCTGCTCATGAAGTTAGGTTCAGAGATGACTTACAGAAAGTGCGAAACTGGAGGTCTGCTCTGTCTGAAGCTGCGAGCTTATCATCAGCATGGCTTTTTGACGATGGGTATGAGTTGGGATTTATTGAAAGGATTGTCGAAGATGCATATACTTTGCTGCCTCCTAAGCGCTACCATAACACTGATCATATGGTTGGACTTGAGCCTCGTATTGAGGAGGTGATGTCACTTCTAAATAAATCTGATGATCGTGTTTGTATGTTCGGGATTCATGGAACTGGTGGAGTTGGCAAAACAACGATTGCCAAAGCTATCTATAATTCAATCTTTTACCAATTTGAAGGTTCATGTTTTTTGTTTGATGTGAAAGAAGCATCAAAGAAGTATCAGGGCATAGTTCGCCTTCAACAGACACTTTTATCGGAGATTCTTGAAGAGAAGAAGATGAAGTTTGGTAGTGTTGATGAAGGAATCTCAAACATAAAACACAGACTCTCTTGCAAAAAGGTCTTGTTGGTTCTTGATGATGTGGATGAGGTTGAACAATTAGAACAACTTTCTGGCGGGTGCGATTGGTTTGGATCTGGAAGCAAGATCATTATAACAACAAGAAATAAGCAATTGCTAATTTCATGTAATGTTAAAATAACATATGAAATGAAGAAGCTAAATCAGCTTTACTCTCTTGAACTTTTTTGCTGGTTTGCCTTTGGTACCAGCCAACCTAAGAAAGGCTATAAAAACATGTCGATTCATGTTATAAGGTATGTGCATGGTCTTCCTCTGGCTTTAAAATTAATAGGCTCCAATTTGGCAAATAAAAGCATTGAGGAATGGAGATCTATATTGAAGCAATACGATGAGATCCCAGAAGGAACAATTCATCATGTATTGAAGATAAGCTATGACTGCTTACAAGACGGTGCTAAGCATATCTTCTTAGATATTGCTTGTTTCTTTAAGGAGGAGAAATTTGAATACGTTGAAGCAATACTGGAAGCTTGTCATAGTGGGGCAAGGTTTTATATTGAAGTTCTTGTTGATAAATCTCTGATAACTGTTCTTGATAATGGTTACTTGTACATGCACGATCTAGTACAGCATATGGGTAGAGAGATAGTTAGGCAAAAAGCACCATATGATCCAGGTGAACGCGGCAGATTATGGTATCACAAAGATGTTCTCAAAGTATTGCGTGAAAATTTAGGAGGCAGGAATATTGAAGGAATAATTCTTGATCCACCTCAGCAAGAAGAAGTGGAGTGGAATGGTTTAGCATTTGAAAAGATGATTAATCTTAGAATTCTTATTGTTCGCAATACCCAATTTTCAGCAAGTCCAAAATATCTTCCAAATAGTTTAGTCTTACTTGATTGGCAGGGATATCCTTCCAAGACTTTACCACTAGACTTTTCTCCCCGAAAACTAATTTGCTTCAAGATATCCGGAAGTCCTTTCAGATTGGAGGACCCATTCAAGAAGTTTGAATATGTGACATATATGGATTTCTCGAAGTGTGAATTCATAACAGAAGTACCTGAGATGTCTCGATTTCAAAATTTGAAAGAATTGAGCTTTAGTGAATGTCACAATCTGATCAAAGTTCATGATTCAGTAGGATCTCTACGTAAGCTTGTCGAATTAGACGTTAGCAAATGCATCAAACTTGCAAGCTTTCCACATGAAATCAAGATGCCATCTCTTCAAGTTCTTAATCTCAATGATTGCAAGAGTCTTGACGACTTCCCACACATTGTGGGAAAAATGGATCAACTGATGTATATTTATGCAGAAGGCACTGCAATTAATGAGCTCCCATCTTCAATTGGAAATCTTCCAAGGCTTGACATTTTGAGTTTAAGATCCTGCAAAAGTCTTAGGGAGCTTCCAAACAGTTTATTGACATTGCATAATCTTGGAGTGCTTCTATTAGGAGGTCTAAAACCTCATGGGAGAAAATCTTTGAAGAAATTATTGCAAGAGAGCCAACCATCAATTGTTAGCTGCACGAAATTAGATCGCCTGGATCTCCATAATTGTGGTCTGTTGGATGAGGATCTTCACCTAACTCTGAAATGTTTTCAGAATGTGAGAGACTTGAATCTGTCAGGGAATGATTTAGTGTCATTTCCTGAGTGTATTAAGGAGTGTGTTCATTTGTGGAAACTAGAAGTGAGTAACTGCAAGAGACTCAGAGATATTACAGAGCTTCCATCAAGTTTAGGGGACATAACGGCAGAGAATTGCACATCATTAACCGTGGAGTCTTCAGGCCATTTGTGGTCTCAGGCCACGAAGTGCCATCGCATGGCAATCTGGATGCCAGCAACAACATATCCTGATTGGTTCAACCATTGCTGTCAAGGAGGGACGTTGTCTTTTCGTGTTCATGGCAGAAATTTCCCTCGTGTTGTCATCGCATTTGAGACAGGGAAGACTAATATAAATAAGAGATACAGTTTTCAGGTGTTCATGAACATCAATGGCAGTAGCAAAATGCCATGGATGCAAAGTGATTTTCCAATCGAAGCTGAAGGAGGTCGTGTTTTGGTTTCTCTTGGTAAACAAGGTCATGTGTTTTTCTCTGATCTACTCGGCGAATTTTCAGAACAAGAGTTAGAGGGGCTTAATAAGTCTCTGGAATTGGATTGGAACGATGTGGAAATTCAAGTTACATGTCGTACAGATGATATAGACATAGTTAATTGTGGAGTTTATGTCGACAAGCAGCAAACAGACATGGAGAATGTCCAGTTCACGTCTTCTAGAACTTCACTGAAACGAAGAGCGATAGCTTCTGTTCCTAACGAACCACCCAAGAAGCTCCTGAGAAAGTCCAAGGCTAGTGATAAAAGAAACATCAATAACACAAAGAAAAGGACAAGGAGGAGAAAGATGTTTTTACCAATGGGTAAGATTCTCTGGAGATTTTTTTGTGATCGTGACAATATGTATTGGCGAAACAGAACATAA 3381 0.3987 MAIQVASPSSFSFTSETSRYRYEYDVFLSFRGEDTRNSFTVPLYNALRRKGINAFIDDKRLGKGEEISPTLLKAIERSRISIIVFSTNYATSTWCLEELAHIVWCRKQKNQLVMPIFYKVDPLDVQYQRNSFEEAMAAHEVRFRDDLQKVRNWRSALSEAASLSSAWLFDDGYELGFIERIVEDAYTLLPPKRYHNTDHMVGLEPRIEEVMSLLNKSDDRVCMFGIHGTGGVGKTTIAKAIYNSIFYQFEGSCFLFDVKEASKKYQGIVRLQQTLLSEILEEKKMKFGSVDEGISNIKHRLSCKKVLLVLDDVDEVEQLEQLSGGCDWFGSGSKIIITTRNKQLLISCNVKITYEMKKLNQLYSLELFCWFAFGTSQPKKGYKNMSIHVIRYVHGLPLALKLIGSNLANKSIEEWRSILKQYDEIPEGTIHHVLKISYDCLQDGAKHIFLDIACFFKEEKFEYVEAILEACHSGARFYIEVLVDKSLITVLDNGYLYMHDLVQHMGREIVRQKAPYDPGERGRLWYHKDVLKVLRENLGGRNIEGIILDPPQQEEVEWNGLAFEKMINLRILIVRNTQFSASPKYLPNSLVLLDWQGYPSKTLPLDFSPRKLICFKISGSPFRLEDPFKKFEYVTYMDFSKCEFITEVPEMSRFQNLKELSFSECHNLIKVHDSVGSLRKLVELDVSKCIKLASFPHEIKMPSLQVLNLNDCKSLDDFPHIVGKMDQLMYIYAEGTAINELPSSIGNLPRLDILSLRSCKSLRELPNSLLTLHNLGVLLLGGLKPHGRKSLKKLLQESQPSIVSCTKLDRLDLHNCGLLDEDLHLTLKCFQNVRDLNLSGNDLVSFPECIKECVHLWKLEVSNCKRLRDITELPSSLGDITAENCTSLTVESSGHLWSQATKCHRMAIWMPATTYPDWFNHCCQGGTLSFRVHGRNFPRVVIAFETGKTNINKRYSFQVFMNINGSSKMPWMQSDFPIEAEGGRVLVSLGKQGHVFFSDLLGEFSEQELEGLNKSLELDWNDVEIQVTCRTDDIDIVNCGVYVDKQQTDMENVQFTSSRTSLKRRAIASVPNEPPKKLLRKSKASDKRNINNTKKRTRRRKMFLPMGKILWRFFCDRDNMYWRNRT 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1976 1126 Gene3D - 18 190 IPR035897 -
Prci11g1976 1126 Gene3D - 191 353 IPR027417 -
Prci11g1976 1126 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 163 IPR035897 -
Prci11g1976 1126 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 769 IPR044974 GO:0006952
Prci11g1976 1126 SMART till_3 23 163 IPR000157 GO:0007165
Prci11g1976 1126 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 190 - -
Prci11g1976 1126 SUPERFAMILY L domain-like 548 892 - -
Prci11g1976 1126 MobiDBLite consensus disorder prediction 1076 1097 - -
Prci11g1976 1126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 452 IPR027417 -
Prci11g1976 1126 Gene3D Ribonuclease Inhibitor 727 892 IPR032675 -
Prci11g1976 1126 Gene3D Ribonuclease Inhibitor 555 726 IPR032675 -
Prci11g1976 1126 Pfam NB-ARC domain 206 428 IPR002182 GO:0043531
Prci11g1976 1126 Pfam TIR domain 24 169 IPR000157 GO:0007165
Prci11g1976 1126 SUPERFAMILY "Winged helix" DNA-binding domain 429 534 IPR036390 -
Prci11g1976 1126 Gene3D - 358 442 IPR042197 -
Prci11g1976 1126 ProSiteProfiles TIR domain profile. 22 189 IPR000157 GO:0007165
Prci11g1976 1126 PRINTS Disease resistance protein signature 223 238 - -
Prci11g1976 1126 PRINTS Disease resistance protein signature 300 314 - -
Prci11g1976 1126 PRINTS Disease resistance protein signature 393 407 - -
Prci11g1976 1126 PRINTS Disease resistance protein signature 699 715 - -
Prci11g1976 1126 MobiDBLite consensus disorder prediction 1076 1091 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1976 Prci-Chr11 17087773 17110869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1976 23 782 WRKY Transcription Factor Family AT4G12020 31.969 2.05e-92 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1976 - - pcin:129284776 1485.7