Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1972 ATGCCCATCTTCTACAAGGTGGATCCCATGGATGTTCAGCATCAGAGAAATAGCTTTGGAGAAGCCATGGCTGATCATGAAGGTGGTAGGTTCAAGAATGAACCGGAGAAAGTGCAAAAATGGAGGTCCGCTTTGTATGAAGCCGCTAGTTTGTCATTTGCATGGCTTTTCCAAGACGGATGTGAATCTGGGTTTATTGAAAGGGTTGTCGAACATGCATATTCTGTGATACCTCCCAAACGCTTCCAGAACGTTGGTCATATGGTTGGAATTGAAAATCGCATAGAGGAATTGATGTCATTTATGGATAAGTCTGATGACCGAGTTTATATGTTGGGCATTTATGGAACTGGCGGAATAGGGAAAACAACTCTTGCAAAAGCTTTGTATAAATCAATCTTCTACCAATTTGATGGTGCATGTTTTTTGTTTGACGTTCGAGAAGAATCAAATAAAAATCAAGGTATTGTTCGTCTTCAACAAACACTTCTATCAGAGATTCTTGAGGAAAAGAAGATGAAGCTTAGCAGTATTGATGAAGGAATCTCAAACATAAAACACAGACTCTCTAGCAAGAAGGTTTTGTTGGTTCTCGATGACGTTGATGAGTTTAAACAGTTAGAACAACTTGCAGGAGGGTGTGATTGGTTTGGTTGTGGGAGCAAGATTATTATAACAACAAGAAATAAGGAAATGCTAATTTCACGTAACGTTGAGAAAACATATGAATTGAAGGAGCTAAATCGACTTTGCTCTCTTGAACTCTTCTGTTGGCATGCCTTTCGTATGAGCCAACCTCCAAGTGGCTATGAAAATATGTCCGATCATGTTATTAGATATGTACGTGGCCTTCCTCTAGCATTAAAACTAGTAGGCTCCAATTTGGCACATAAGGACTTTGAAGAATGGAGATCTACATTGGAACAGTACAAGAGAATCCCTGAAAGAACAATCCATGAGGTACTTAAGATAAGCTATGATTGCCTACCAGATGGTGCTAAGCGTGTTTTTCTAGATATTGCTTGTTTCTTTAAAAAGAAGGCATTAGAATTCATTGAAGACATACTAGAAGCCTGTGATGATGGGGCAAGGTTTTATATTGAAGTTCTTGTTGATAAATCTTTGATCACTATTGATGAAAATAACAGTCGCTTGTACATGCATGATCTCATACAACAAATGGGCAAGGAGATTGTTAGGCAAGAGGCACCGTCAAATCCTGGTCAACGCAGTAGATTATGGGATCACAAAGATGTTCTTAAAGTACTATGTGAAAATTCGGGAAGCAGTAATATTGAAGGAATAATACTAGATGCACCTGATCAAAAAGTGGAGTGGAGTGGTATAGCATTTGAGAAGATGAATAATCTCAAGATTCTCATCATTCGAAATGCCCAATTTTCAACAAATTCCAAACATTTTCCAAATAGTTTAAGATTGCTTGACTGGAAAGGATATCCTTCTATGACTTTACCACCAGATTTTTCTCCTTCGAAGCTAATTTGCTTGAAGTTAAATCGAAGTCGGTTCACATTGGAAGAGCCATTCAAGAAGTTTGAATACGTGACATATGTGACATATTTGGATTTCTCTAAGTGTAAGTTCATTACTGAAGTACCTGATATGTCGCAATTTCAAAATTTAAAAACATTGATCTTCCGTAAATGTCGCAATCTGACCAAAGTTCATGATTCGGTGGGATCTCTCCGCAAGCTTGAGAGATTAGATGTTAGCGTCTGCCCCAAACTTACAAGCTTTCCACATGAAATCAACATGGCATCTCTTCAAGATCTTAACTTCAACCTTTGCAAAAGTCTTGACAACTTCCCACATATAGTAGGAAAGATGGAACATGTCTTTATGGTTTCGGTAACAAACACTGCTATTAAAGAGCTCCCACCTTCCATTGGAAATTTTCCAGAGCTTTTCGGCCTACATTTAAGTGACTGCACAAGTCTCAGGGAGCTTCCAAATAGCCTATTGACGCTGCCAAAACTTAGGTATCTTTTGTTGGAAGGCCTTCACCCTCTTGGTAGAGAATCTTTCAAGAAACTGATGCAACAGAGTCAATCAGTTATTTGCTGTGAAAATATAAAGACCTTGCATCTCAGCAATTTCGGTCTATCGGATGAAGACCTTCACCTAACTCTGAAATGTTTTCAGAATGTGGAAGAGTTGGATCTTTCAAAGAATGATTTTGTGTCACTTCCCGAGTGCATTAAAGAGTGTGCGTATTTGGAGTGTCTATATCTGACTAACTGCGAGAGGCTAAGAGACATACCAGAGCTGCCATAA 2295 0.3874 MPIFYKVDPMDVQHQRNSFGEAMADHEGGRFKNEPEKVQKWRSALYEAASLSFAWLFQDGCESGFIERVVEHAYSVIPPKRFQNVGHMVGIENRIEELMSFMDKSDDRVYMLGIYGTGGIGKTTLAKALYKSIFYQFDGACFLFDVREESNKNQGIVRLQQTLLSEILEEKKMKLSSIDEGISNIKHRLSSKKVLLVLDDVDEFKQLEQLAGGCDWFGCGSKIIITTRNKEMLISRNVEKTYELKELNRLCSLELFCWHAFRMSQPPSGYENMSDHVIRYVRGLPLALKLVGSNLAHKDFEEWRSTLEQYKRIPERTIHEVLKISYDCLPDGAKRVFLDIACFFKKKALEFIEDILEACDDGARFYIEVLVDKSLITIDENNSRLYMHDLIQQMGKEIVRQEAPSNPGQRSRLWDHKDVLKVLCENSGSSNIEGIILDAPDQKVEWSGIAFEKMNNLKILIIRNAQFSTNSKHFPNSLRLLDWKGYPSMTLPPDFSPSKLICLKLNRSRFTLEEPFKKFEYVTYVTYLDFSKCKFITEVPDMSQFQNLKTLIFRKCRNLTKVHDSVGSLRKLERLDVSVCPKLTSFPHEINMASLQDLNFNLCKSLDNFPHIVGKMEHVFMVSVTNTAIKELPPSIGNFPELFGLHLSDCTSLRELPNSLLTLPKLRYLLLEGLHPLGRESFKKLMQQSQSVICCENIKTLHLSNFGLSDEDLHLTLKCFQNVEELDLSKNDFVSLPECIKECAYLECLYLTNCERLRDIPELP 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1972 764 Pfam TIR domain 1 84 IPR000157 GO:0007165
Prci11g1972 764 Gene3D - 81 241 IPR027417 -
Prci11g1972 764 PRINTS Disease resistance protein signature 111 126 - -
Prci11g1972 764 PRINTS Disease resistance protein signature 188 202 - -
Prci11g1972 764 PRINTS Disease resistance protein signature 281 295 - -
Prci11g1972 764 PRINTS Disease resistance protein signature 567 583 - -
Prci11g1972 764 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 658 IPR044974 GO:0006952
Prci11g1972 764 Gene3D - 247 330 IPR042197 -
Prci11g1972 764 Gene3D Ribonuclease Inhibitor 593 764 IPR032675 -
Prci11g1972 764 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 340 IPR027417 -
Prci11g1972 764 SUPERFAMILY L domain-like 387 761 - -
Prci11g1972 764 Gene3D Ribonuclease Inhibitor 400 592 IPR032675 -
Prci11g1972 764 Gene3D - 1 80 IPR035897 -
Prci11g1972 764 Pfam NB-ARC domain 92 312 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1972 Prci-Chr11 17029546 17037748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1972 2 679 WRKY Transcription Factor Family AT4G12020 31.313 1.75e-87 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1972 - - pcin:129285871 1536.16