Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1971 ATGCTACCTCCTAAACGCTTCCATAACAATGATCACTTGGTTGGACTTAAGCCTCGCGTAGAGGAGTTGATGTCAATCATAAATAAATCTGATTTGTATGTTGGGGATTTATGGAACTGGTGGAATTGGCTCTCTCACAAAAAGGTTTTGTTGGTTCTTGACGATGTTGATGAGGTTGAACAATTAGAACAACTTGCTGGCGGGTGTGATTGGTTTGGTCGTGGAAGCAAGATCATTGTAACGACAAGAAACAAGCAATTGCTGAATGCATGTATTGTTAAAAGCACATGTGAAATGAAGAAGCTAAATGAACATGACTCTCTTGAGCTCTTTTGTTGGCATGCATTTCGAATGAGCCAACCTCCAAAAGTCAATGAAAATATGTCTGCTCGGGTTATAAGATATTGTGAGAGAATCCAAGAAAGAACAACCCATGAGGTACTAAAGATAAGCTATGATTGTTTACAAGATGCTGCTAAGCATATTTTTCTAGATATTGCCTGTTTCTTTACACACAAGCCATTGGAGTTTGTTGAAGACATACTAGAAGCCTGTCAACATTGGGCAAGGTTTTATATTGAAGTTCTTGTCGATAAATCTTTGATAACTATTGATGATAATAATGGTAGCTTGTACATGCACGACCTAATACAACAAATGGGCAAAGAGGGAACCATTAATATTGAAGCAATAATACTCAATCCGCCTCAACAAGAAAAAGTGGAATGGGATGGTTTAGCCTTTGAGAAGATGAATAAGCTCAAGATTCTCATTGTTCGAAATGCCCAATTTTCAACAAGTCCTAAATACTTTCACTATAGTTTGAGATTCCTTGACTGGAAAGGATATCCTTCTGCAAGCCAGATTTTTCTCCTTCAAGACTTGTTTGCTTCAAGTTATATGGAAGTCTTTTCAGATTGCAAGAACCATTCAAGTACGAAGGAGGTTTCTCAGAAATTCAGTATCGGATTAGATATATATTTAAAGGAGAAGGTTGAACATGAAACATACATGGATTTCTCACTCTGTGAATTGATAACTGAAGTACCTGATTTGTCACAATTTCAAAGTTTAAAGACGCTGAGCTTTCGTGAATGTCAAAATCTGGTCAAAGTTCATGATTCCGTGGGATCACTATCCATGCTTGAAAGATTAGATGCTAGTGAATGCACCAAACGGACAATCTTTCCACATGAAATCAACATGGCATCTCTTCAAGAGCTTGATCTCAGTCATTGCAAGAGTCTTGATTACTTACCAAGCATAGTAGGAAAGATGGAATATCTAATGCAAATTTTGGCAGAAGACACTGCTATTACGGAGCTCCCGCCTTCCATTGAAAATCTTCCGATTCTTGATCGTTTAGTTTTAAGCTCTTGCACATATCTTAGGGAGCTTCCAAATAGCTTATTGAAGTTGGAATATCTTAAGGAGCTTGAGTTGTCAGGGATTCAACCTGCTTGTACAAAACCATTGATCAACGTAATGCAACAAAGCCAACCAGTTGGCGTTAGCTGCTCAAACGTAGAGGACTTGGATCTTGAGAATTGTGGTCTGTTAGATGAAGATCTTCACGTGATTCTGACATGTTTTCAAAATGTGAAAGAGTTGAATCTTCCAGGGAATGATTTTGTGTCCCTTCCTGAGTGCATTAAAGAGTGTGCTTATTTGGAGAAACTGAATCTGAGTGATTGCAAGAGGCTAAGAGACATACCAGAGCTGCCATCAACGTTGCAGCAAATAGCTGCAGAGGATTGCACGTCATTGACTACAGAGTCGTTAGACCGTTTATGTCATGTGTTTCTCACGGATCTGGAATGGAATTTTAATGATGAAGATTTAGAAGGGCTTAACAAGTTTCTGGAACTGGATTGGAATGACGTGGAAATACATTTTACACGTGACCCACCTGATATCTCCACAGTTAACTGTGGTGTTTATGTTGATAAGGAGCAAACAGACATGGATAACGTCCAGTTCAAGTCTTCAGATGTGCTTTCCATGAGTTCTTCAACAATTTCACTGAAACGAAGAGGGATAAATTTGCTTCTTAATGAGAAACCACCCAAGAAGCTCCTGAGAAATTAA 2088 0.386 MLPPKRFHNNDHLVGLKPRVEELMSIINKSDLYVGDLWNWWNWLSHKKVLLVLDDVDEVEQLEQLAGGCDWFGRGSKIIVTTRNKQLLNACIVKSTCEMKKLNEHDSLELFCWHAFRMSQPPKVNENMSARVIRYCERIQERTTHEVLKISYDCLQDAAKHIFLDIACFFTHKPLEFVEDILEACQHWARFYIEVLVDKSLITIDDNNGSLYMHDLIQQMGKEGTINIEAIILNPPQQEKVEWDGLAFEKMNKLKILIVRNAQFSTSPKYFHYSLRFLDWKGYPSASQIFLLQDLFASSYMEVFSDCKNHSSTKEVSQKFSIGLDIYLKEKVEHETYMDFSLCELITEVPDLSQFQSLKTLSFRECQNLVKVHDSVGSLSMLERLDASECTKRTIFPHEINMASLQELDLSHCKSLDYLPSIVGKMEYLMQILAEDTAITELPPSIENLPILDRLVLSSCTYLRELPNSLLKLEYLKELELSGIQPACTKPLINVMQQSQPVGVSCSNVEDLDLENCGLLDEDLHVILTCFQNVKELNLPGNDFVSLPECIKECAYLEKLNLSDCKRLRDIPELPSTLQQIAAEDCTSLTTESLDRLCHVFLTDLEWNFNDEDLEGLNKFLELDWNDVEIHFTRDPPDISTVNCGVYVDKEQTDMDNVQFKSSDVLSMSSSTISLKRRGINLLLNEKPPKKLLRN 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1971 695 SUPERFAMILY RNI-like 248 622 - -
Prci11g1971 695 PRINTS Disease resistance protein signature 400 416 - -
Prci11g1971 695 PRINTS Disease resistance protein signature 43 57 - -
Prci11g1971 695 Gene3D - 146 223 IPR036388 -
Prci11g1971 695 Gene3D Ribonuclease Inhibitor 432 636 IPR032675 -
Prci11g1971 695 Gene3D - 12 96 IPR027417 -
Prci11g1971 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 166 IPR027417 -
Prci11g1971 695 SUPERFAMILY "Winged helix" DNA-binding domain 145 223 IPR036390 -
Prci11g1971 695 Gene3D Ribonuclease Inhibitor 244 431 IPR032675 -
Prci11g1971 695 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 42 470 IPR044974 GO:0006952
Prci11g1971 695 Pfam NB-ARC domain 42 136 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1971 Prci-Chr11 17017866 17022021 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1971 44 595 WRKY Transcription Factor Family AT5G45050 27.110 1.09e-34 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1971 - - pcin:129286214 1367.06