Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1965 ATGGCGATTCAAGTTCCATCACCATCATCCTATGGCTTTGCCCGCGAACCAAAGTTTAGATATGATGTTTTTCTGAGCTTTAGAGGTGAAGATACTCGTCACTCCTTCACTGTCATCCTCTACGATGCTCTGCGCCGTAAGGGAATCAACGCCTTCATAGACGACAAGAAGCTCGGGAAAGGGGAACGGATCTCACCGGCGCTTCTTAAAGCCATAGAGAAATCGAGGGTTTCGATCATTGTGTTCTCTATGAACTACGCTACTTCCACATGGTGCCTAGAGGAACTGACCCACATCATTCGATGTAAGAAGGAGAAGAACCAGCTGGTTATGCCAATATTCTACAAGGTGGATCCAATGGATGTCCAATATCAGAGGAATAGCTTTGGCGAAGCCATGGCTGCTCATGAAGACAGGTTCAGAAATGATTTGGAGAAAGTGAGAAGATGGAGGTTTGCTTTGTCTGAAGCAGCTAGTTTGTCGTCGGCCTGGCTTTTTAAAGATGGATACGAATTTGGGTTTATTGAAAGGATTGTTGAAGATGCATGTGCTAGGCTGCCTCCTAAACGCTTCCATAACACTGATTACATGGTTGGACTTGAGCCTCGTATAGAAAAAGTAATGTCACTTCTGGGTGAAACTGATGATAGAGTTTGTATGTTGGGGATTCATGGAACCGGGGGGATTGGCAAAACAACCCTTGCAAAAGCCTTGTATAATACAATCTTCTACCAATTTGAAGGTGCATGCTTTTTGTTTGACGTTAGAGAAGAATCAACAAAATATCATGGCATGGTTCGCCTTCAACAAACGCTTTTATCAGAGATTCTTGAGGAAAAGAGGATAAAGTTTAGCAGTGTTGATGAAGGAATATCTATACTAAGACACAGACTCTCACATAAAAAAGTTTTGCTGGTTCTTGATGATGTTGATCAGCTTGATCAGTTAGAACAACTTGCAGGAGGGTGTGATTGGTTTGGCTGTGGAAGCAAGGTCATTATAACAACGAGAAATAAGCAATTGTTAGTTGCACGTGACATTGAAAAAACATATGAAATGACGGCGCTGAATGATTATGACTCTCTTGAACTCTTTTGTTGGCATGCCTTTCATTTGAGCCATCCTCCAAAAGGCTATCAAGATATGGCAAGTCATGCCATAAGATATGCACAAGGCCTTCCTCTTGCTTTAAGATTAATAGGCTCCAATTTGGCACATAGAAACTTAGAAGAATGGAGGTCTACATTGGAACAATATGAGAGGATTCCGGAAAGAACAATTCATAATATACTAAAGATGAGCTATGATTGCTTACAAGACAATGCTAAGCGTATTTTCCTAGATATTGCTTGTTTCTTTAAGGCAAAGACATTTGTATACATTGAAGACATAATAGAAGCTTTTGATTTTGGTGGAAGGTTCTATTTTGAAGTGCTTGTTGAAAAATCTCTTGTAACTATTTCTGGTATTGGTAAGTTGTGCATGCATGATCTAATACAACAGATGGGTAGAGAGATTGTTAGGCAAGAGGCACCATCAAGTCTTGATAAACGCAGTAGAATATGGTATTACAAGGATGTTCTTAAAGTGCTATGTGAAAATTTAGGAAACAGTAATATTGAAGGAATAATGCTTGATCCACCTCAACAAGAAGAAGTGAGATGGAATGGTATGGCCTTTGAGAAGATGACTAATCTTAGGATTCTTGTGATTCGGAATACCCAATTTTCAACTTACCCTAAATACTTACCCAATAGTTTAAGATTGCTTGATTGGGAGGGATATCCTTCAGCAAATTTACCACCAGATTTTTCTCCTAAGAAACTAATTTCCTTGAAGTTATGCAATAGTATCTTCAGACTGGAAGAGCCGTTCAAGAGGTTTGAATGCGTGACATACATGAACGTTTCACATTGTGAATTCATAACTGAAGTACCTGATATGTCTCAATTCCCAAATTTAAAAAACTTGTTGTTTAGAGAGTGTTGCAATCTGAACACAATACACTATTCCGTGGGATCTCTCTCTAAGCTAGTCCACTTAGATGTTAGTAACTGCAACAAACTTACAAGCTTTCCACATGAAATCAACATGCCATCTCTTCAAGATATTAATCTTAGCCGTTGCAAGAGTCTTGACTACTTCCCACATATAGTGGGGAAGATGGATGCATTAACGGATATTTGGGCAGAAGACACTGCTATTAAGGAGCTCCCACCTTCCATTGGAAATCTTACCGGGCTTGAATGTTTAAATTTAAGCTCTTGCAAAAGTCTCAGGGAGCTTCCAAACAGCTTATTCACGTTGCAAAATCTTGAGTGGCTTGAGTTGAGAGACAGTCACCCTCCTAGCAGAAAATCTTTGATGAAATTAATGCAAGAGAGGCTACTAGCTGTTAGCTGCGCAAACATAAAGTTCTTGAATCTTGAAAACTGTTGTCTGTTGGATGAAGATCTTATCCTAATATTGAAATTTTTCCGGGATTTGCAAGAGTTAACTCTTTCAGGGAATGATTTTGTGTCCCTTCCTGAGTGCGTCAGAGAGTGTGCTGAATTGCTGAAATTGGAAGTGGATGACTGCAAGAAGCTGAGAGACATACCAGAGTTGCCATCAAAGCTAAGCGACATTAAGGCAGAGAATTGCACATCATTAACTACCAAGTCATTTGATCATTTATGGTCTCAGGTCAAGAATGAAATTGATCTCTTGAGAATATGTATGCCAGCAACAACATTTCCTGATTGGCTTGATGATTGCTGTAAAGGAGGGACACTGTCTTTTCATGCTCGCGGGAATTTCCCTCGCGCTGCCCTAGCATGTGAGTTGGGGAAAGCAGACAGGAGAGGGAGACACTTCTTCCATGTTTCTGTGAACATCAATGGTCATGAAATACTAAGGAAACAAGATGTAAATTATGGAAGTACACAAGGTCACGTGTTCTTGTTTGATTTAAGATGGTCTTTTGAGGGAGCAGAGTGGAAGAGGCTTGATAGGCATCTGAACTTGGATTGGAATGATGTGGAAATACAAGTCACATGTTTAACACCAAACTTGCCTGTAGTTTGCTGTGGAATTTACGTGTACACACAGCACACAAACATGGAGAATGTGCAGTTCAATTCTTCTCAGCTTTCCATGAATGCTCCTACATCTCTGAAACGAACAGAGACTGCTTCTCCTCCTAATGAACCACCCAACAAGTTCCTGAGAAAGTTCATGGCTGCTGATAAAAAGAAAACTCAATAA 3246 0.4011 MAIQVPSPSSYGFAREPKFRYDVFLSFRGEDTRHSFTVILYDALRRKGINAFIDDKKLGKGERISPALLKAIEKSRVSIIVFSMNYATSTWCLEELTHIIRCKKEKNQLVMPIFYKVDPMDVQYQRNSFGEAMAAHEDRFRNDLEKVRRWRFALSEAASLSSAWLFKDGYEFGFIERIVEDACARLPPKRFHNTDYMVGLEPRIEKVMSLLGETDDRVCMLGIHGTGGIGKTTLAKALYNTIFYQFEGACFLFDVREESTKYHGMVRLQQTLLSEILEEKRIKFSSVDEGISILRHRLSHKKVLLVLDDVDQLDQLEQLAGGCDWFGCGSKVIITTRNKQLLVARDIEKTYEMTALNDYDSLELFCWHAFHLSHPPKGYQDMASHAIRYAQGLPLALRLIGSNLAHRNLEEWRSTLEQYERIPERTIHNILKMSYDCLQDNAKRIFLDIACFFKAKTFVYIEDIIEAFDFGGRFYFEVLVEKSLVTISGIGKLCMHDLIQQMGREIVRQEAPSSLDKRSRIWYYKDVLKVLCENLGNSNIEGIMLDPPQQEEVRWNGMAFEKMTNLRILVIRNTQFSTYPKYLPNSLRLLDWEGYPSANLPPDFSPKKLISLKLCNSIFRLEEPFKRFECVTYMNVSHCEFITEVPDMSQFPNLKNLLFRECCNLNTIHYSVGSLSKLVHLDVSNCNKLTSFPHEINMPSLQDINLSRCKSLDYFPHIVGKMDALTDIWAEDTAIKELPPSIGNLTGLECLNLSSCKSLRELPNSLFTLQNLEWLELRDSHPPSRKSLMKLMQERLLAVSCANIKFLNLENCCLLDEDLILILKFFRDLQELTLSGNDFVSLPECVRECAELLKLEVDDCKKLRDIPELPSKLSDIKAENCTSLTTKSFDHLWSQVKNEIDLLRICMPATTFPDWLDDCCKGGTLSFHARGNFPRAALACELGKADRRGRHFFHVSVNINGHEILRKQDVNYGSTQGHVFLFDLRWSFEGAEWKRLDRHLNLDWNDVEIQVTCLTPNLPVVCCGIYVYTQHTNMENVQFNSSQLSMNAPTSLKRTETASPPNEPPNKFLRKFMAADKKKTQ 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1965 1081 PRINTS Disease resistance protein signature 220 235 - -
Prci11g1965 1081 PRINTS Disease resistance protein signature 297 311 - -
Prci11g1965 1081 PRINTS Disease resistance protein signature 673 689 - -
Prci11g1965 1081 PRINTS Disease resistance protein signature 390 404 - -
Prci11g1965 1081 Pfam TIR domain 21 166 IPR000157 GO:0007165
Prci11g1965 1081 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 160 IPR035897 -
Prci11g1965 1081 Pfam NB-ARC domain 203 438 IPR002182 GO:0043531
Prci11g1965 1081 Gene3D - 16 188 IPR035897 -
Prci11g1965 1081 MobiDBLite consensus disorder prediction 1048 1062 - -
Prci11g1965 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 449 IPR027417 -
Prci11g1965 1081 Gene3D Ribonuclease Inhibitor 715 902 IPR032675 -
Prci11g1965 1081 Gene3D - 189 349 IPR027417 -
Prci11g1965 1081 SMART till_3 20 160 IPR000157 GO:0007165
Prci11g1965 1081 Gene3D Ribonuclease Inhibitor 528 714 IPR032675 -
Prci11g1965 1081 SMART LRR_typ_2 675 699 IPR003591 -
Prci11g1965 1081 SMART LRR_typ_2 826 849 IPR003591 -
Prci11g1965 1081 SMART LRR_typ_2 563 586 IPR003591 -
Prci11g1965 1081 SMART LRR_typ_2 745 769 IPR003591 -
Prci11g1965 1081 ProSiteProfiles TIR domain profile. 19 186 IPR000157 GO:0007165
Prci11g1965 1081 MobiDBLite consensus disorder prediction 1048 1081 - -
Prci11g1965 1081 Gene3D - 355 439 IPR042197 -
Prci11g1965 1081 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 186 - -
Prci11g1965 1081 SUPERFAMILY L domain-like 544 893 - -
Prci11g1965 1081 SUPERFAMILY "Winged helix" DNA-binding domain 426 531 IPR036390 -
Prci11g1965 1081 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 802 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1965 Prci-Chr11 16973743 16979860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1965 17 777 WRKY Transcription Factor Family AT4G12020 31.888 1.79e-91 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1965 - - pcin:129284776 1354.35