Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1962 ATGGATTCAGAACAAACGGAGAAGAAAGGAACCATTCTGATGCAGAAATACGAGCTAGGCCGTTTGTTAGGCCAAGGCACATTCGCCAAAGTCTACCACGCCAGAAACATCAAAACCAACGAGAGCGTCGCCATTAAAGTCATCAACAAGCAGAAGATTCTCCGAATCGGCTTGATCGACCAAATCAAGCGCGAGATCTCCGTGATGCGCCTCGTAAGGCACCCCAACATCGTCCAGCTCTACGAAGTAATGGCCAGCAAAACCAAAATCTACTTCGCAATGGAGTACGTCAAAGGCGGCGAGCTCTTCGCCAAAGTGGCCAAAGGGAAATTGAAGGAGGATTTGGCGCGAAAGTACTTCCAACAGCTAATCGGCGCCGTCGATTTCTGCCATAGCCGAGGGGTGTATCATCGAGATCTGAAACCGGAGAACCTGCTTCTGGACGAAAATGGGGATCTGAAGATTTCGGATTTTGGGTTGAGTGCTTTGTACGAACCCAGAAAGAACGATGGTCTTCTGTACACAACGTGTGGAACACCTGCATATGTAGCCCCTGAAGTGCTCAACAAGAAAGGTTATGATGGAGCAAAAGCTGATATATGGTCTTGTGGGGTTGTTCTGTTTGTTCTTCTTGCAGGTTTTCTTCCATTTCAGGATAAAAATCTAATTGAAATGTATCGGAAAATTAATACTGCGGATTTCAAGTGCCCCAAATGGTTCCAACCCCAAGCTAGAAGGGTTATCACCAGAATTCTCGATCCAAATCCAAGAACAAGAGTGAGTATTGCTAAGATTATGGAAAATGGCTGGTTTAAAGTTGGGTATCAGCAGATTGAACCACCCAAATCACCAGTTTCCAACCCTGTAATTGACGTTCAAGCTGCTTTTGATTCTTCATCATCAAGCCCATCAAAGGAAGAAACCCACGAAAACACAATGAAAGTGAAGCCATCTTTCTTCAATGCGTTTGATATAATATCTCTATCTTCAGGATTTGATCTCTCTGGTTTGTTTGAGGAAGACAAGCGTCGGAGGCAACAAGCTAGATTCACCACAACTCAGCCGGCCTCGAAAATTGTGTCGAAACTGGAAGAAATAGCAGAAGCAGAGAGCAGATTCAAGGTTGTGAAGAAAGATGGGAAAGTGAGATTGGAGGGAAGCAAATCAGGTAGGAAAGGAACACTTGGAATCGATGCAGAGATATTTGAGGTGACGTCATCGTTTCATGTTGTGGAGGTGAAGAAAACTGCAGGAGATACGTTTGAGTATATTCAGTTTAGGGATCAGAGCTTGAAGCCTTCATTGAAGGATATAGTGTGGGCTTGGGAAGGAGGCGAGCAGTAG 1344 0.4494 MDSEQTEKKGTILMQKYELGRLLGQGTFAKVYHARNIKTNESVAIKVINKQKILRIGLIDQIKREISVMRLVRHPNIVQLYEVMASKTKIYFAMEYVKGGELFAKVAKGKLKEDLARKYFQQLIGAVDFCHSRGVYHRDLKPENLLLDENGDLKISDFGLSALYEPRKNDGLLYTTCGTPAYVAPEVLNKKGYDGAKADIWSCGVVLFVLLAGFLPFQDKNLIEMYRKINTADFKCPKWFQPQARRVITRILDPNPRTRVSIAKIMENGWFKVGYQQIEPPKSPVSNPVIDVQAAFDSSSSSPSKEETHENTMKVKPSFFNAFDIISLSSGFDLSGLFEEDKRRRQQARFTTTQPASKIVSKLEEIAEAESRFKVVKKDGKVRLEGSKSGRKGTLGIDAEIFEVTSSFHVVEVKKTAGDTFEYIQFRDQSLKPSLKDIVWAWEGGEQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1962 447 Gene3D Transferase(Phosphotransferase) domain 1 102 276 - -
Prci11g1962 447 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1962 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Prci11g1962 447 ProSiteProfiles NAF domain profile. 315 339 IPR018451 GO:0007165
Prci11g1962 447 FunFam Non-specific serine/threonine protein kinase 7 314 - -
Prci11g1962 447 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1962 447 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1962 447 Pfam NAF domain 317 377 IPR004041 GO:0007165
Prci11g1962 447 FunFam Non-specific serine/threonine protein kinase 315 440 - -
Prci11g1962 447 CDD STKc_SnRK3 16 270 - -
Prci11g1962 447 Gene3D Phosphorylase Kinase; domain 1 10 101 - -
Prci11g1962 447 SUPERFAMILY Protein kinase-like (PK-like) 13 323 IPR011009 -
Prci11g1962 447 CDD CIPK_C 321 436 - -
Prci11g1962 447 Gene3D Kinase associated domain 1, KA1 314 441 - -
Prci11g1962 447 FunFam Non-specific serine/threonine protein kinase 8 96 - -
Prci11g1962 447 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Prci11g1962 447 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1962 Prci-Chr11 16917280 16919047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1962 7 444 CBL-interacting serine-threonine protein kinases AT5G45820 68.397 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Prci11g1962 Pkinase 2.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1962 K07198 - vvi:100258329 647.506