Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1958 ATGGCTTCGGAAAAGAAGTCTTCGAATCCAATGAGGGAAATCGAAGTCCAAAAGCTCGTCATCAACATCTCTGTTGGTGAAAGTGGTGATCGTCTCACTAGAGCTGCTAAGTATTGTGATTTGGTGTTGGAGCAACTAAGCGGACAAAGCCCAGTATTCTCAAAAGCTAGGTATTCAGATCTTTTAGAATCAGGCGTAATGAAAAGTTTGCTTGCTATGTCGCCGTCGGAGGTGAGAAGGCAATGCAGCTTCTTGAGAGTGGGTTGA 267 0.4457 MASEKKSSNPMREIEVQKLVINISVGESGDRLTRAAKYCDLVLEQLSGQSPVFSKARYSDLLESGVMKSLLAMSPSEVRRQCSFLRVG 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1958 88 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 2 59 IPR002132 GO:0003735|GO:0005840|GO:0006412
Prci11g1958 88 Gene3D - 1 60 IPR022803 -
Prci11g1958 88 SUPERFAMILY RL5-like 8 59 IPR022803 -
Prci11g1958 88 Pfam Ribosomal protein L5 9 59 IPR031310 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1958 Prci-Chr11 16707469 16708615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1958 1 59 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 81.356 1.02e-26 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1958 K02868 - pcin:129285392 170.244