Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1957 ATGGCTTCGGAAAAGAAGTCTTCGAATCCAATGAGGGAAATCGAAGTCCAAAAGCTCGTCATCAACATCTCTGTTGGTGAAAGTGGTGATCGTCTCACTAGAGCTGCTAAGTATTGTGATTTGGTGTTGGAGCAACTAAGCGGACAAAGCCCAGTATTCTCAAAAGATCTTTTAGAATCAGGCGTAATGAAAAGTTTGCTTGCTATGTCGCCGTCGGAGGTGAGAAGGCAATGCAGCTTCTTGAGAGTGGGTTGA 255 0.4471 MASEKKSSNPMREIEVQKLVINISVGESGDRLTRAAKYCDLVLEQLSGQSPVFSKDLLESGVMKSLLAMSPSEVRRQCSFLRVG 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1957 84 Gene3D - 1 65 IPR022803 -
Prci11g1957 84 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 2 55 IPR002132 GO:0003735|GO:0005840|GO:0006412
Prci11g1957 84 SUPERFAMILY RL5-like 8 55 IPR022803 -
Prci11g1957 84 Pfam Ribosomal protein L5 9 55 IPR031310 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1957 Prci-Chr11 16707449 16708615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1957 1 55 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 81.818 6.47e-24 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1957 K02868 - pcin:129285392 156.762