Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1929 ATGAAGTGGGGTAGAAGAAAATCCTCTTCAGTTTCTTCTTCATCCAAACCATCCTTTATCTCTCATATATCTCCCCTTTCATGGCTGTCGAAGTTCAAGAAGATGAGAATCAGCACAGAGCCAGTTCCTGGCAAATTGAAACAAAAGGGTGTACGGAATTCTTCATCGGTTCCTTCACTGCAGTATACTTGTGGTAACGGTGATAGGTTTTATGGTGGGGATGATGAAGCGTTTTGGAGACTTTCGTTTGGCGAGGAGAGTCATGAAGACAAGAAAAGTAAAGATACTGTGAAATCAGTAATGCACATTATGGATAAAGATGGCAGATGGAATGCTGAGAAACAGGAAAGAAGGAGAGAAGGGACTTCAACATTCAAGGAGGATCACAGAAAGTTAGACGTTGAAAGTCATTTGCCAAATGATACGAAGTTTTCACCAGAGATAAATGAGCACAATCGAGAAAAGGAATTCGAAAACTTGAGGAGGAGATTTGGGAGGAAAACTCGGAGAGTTTTGCAACAGCAAGTCTTAAAATTAGAAAGAGAAGCAGAGAATGCATCAGATTTATCAGAAGAGAAAGAGATGCCACGGCTTGCATCACCTGGAACAATTTGGACACCAAGAAGACAATCTTTTGCCCATTCAGAAGATTCTAAGAAGTCAAGCAATGCACGAACGAAAGATCATGCATTTAATACTCAGAACCTTCAGAAGCATAAGAGGCAGAATTTGCATCAACCTGAGGAGTTGAAGGCAAAGACTGACAAGAAGAGTCAAGCATTTCATGAAAGCAGAGAAGTCCACAGGAGGAAATCAAAGTACAGCTCTAAGGTTAAAGTATTTTCTCCAAGGACGAGCTCCAATGTTGAAATCTGTAGAATAAAGGCTATAGAAGACATGAGAAAAGCCAAACTAAAGATGAAGAAGGAAAGGGAGAAAATCAGGGAGGAAACACAAGACTTAGATAGCTTTGCTGTGGTAAAGTTTTCTTTGGACCCACAACAGGACTTCAGAGAATCAATGGTTGAGATGATCAGAGAGAAGCAGATCAGCCAACCAGAAGACATGGAAGAGCTTTTAGCATGTTATCTGACTTTGAATTCTGATGAATATCATGATCTCATCATCAAGGTATTCCGGCAGGTATGGTTTGGCATGCACTTAGATAGAAAGGGAATTAAGTTAAACAAGCAGTGCTGCTATGACTAG 1209 0.4045 MKWGRRKSSSVSSSSKPSFISHISPLSWLSKFKKMRISTEPVPGKLKQKGVRNSSSVPSLQYTCGNGDRFYGGDDEAFWRLSFGEESHEDKKSKDTVKSVMHIMDKDGRWNAEKQERRREGTSTFKEDHRKLDVESHLPNDTKFSPEINEHNREKEFENLRRRFGRKTRRVLQQQVLKLEREAENASDLSEEKEMPRLASPGTIWTPRRQSFAHSEDSKKSSNARTKDHAFNTQNLQKHKRQNLHQPEELKAKTDKKSQAFHESREVHRRKSKYSSKVKVFSPRTSSNVEICRIKAIEDMRKAKLKMKKEREKIREETQDLDSFAVVKFSLDPQQDFRESMVEMIREKQISQPEDMEELLACYLTLNSDEYHDLIIKVFRQVWFGMHLDRKGIKLNKQCCYD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1929 402 Coils Coil 293 320 - -
Prci11g1929 402 MobiDBLite consensus disorder prediction 178 273 - -
Prci11g1929 402 MobiDBLite consensus disorder prediction 178 195 - -
Prci11g1929 402 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 223 386 IPR038933 GO:0045892
Prci11g1929 402 MobiDBLite consensus disorder prediction 106 152 - -
Prci11g1929 402 MobiDBLite consensus disorder prediction 1 21 - -
Prci11g1929 402 MobiDBLite consensus disorder prediction 241 270 - -
Prci11g1929 402 Coils Coil 169 192 - -
Prci11g1929 402 MobiDBLite consensus disorder prediction 212 226 - -
Prci11g1929 402 Pfam Transcriptional repressor, ovate 330 385 IPR006458 -
Prci11g1929 402 MobiDBLite consensus disorder prediction 40 59 - -
Prci11g1929 402 NCBIfam uncharacterized plant-specific domain TIGR01568 325 385 IPR006458 -
Prci11g1929 402 ProSiteProfiles OVATE domain profile. 326 385 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1929 Prci-Chr11 16326241 16327936 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Prci11g1929 Ovate 3.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1929 - - qsa:O6P43_012832 353.214