Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1921 ATGGCTGATGGGGCGTCTGGAAGTAATGGAACCTGCCACTATGCCGTTCTGAATGTCGAAGACAAACAACACAATAATGAAGGTTCCTGCATCTCTGTCTCCGCCCCTTTCTCGCGGAAGTTGGTGGCGGAATCCGCGGGGACATTTTTTCTGATGTTTGGCGGAGAAGCATCGGAGGTGTTGGACGAGGGGTACGGCAACAAATTATCGCTTCCTGGGATTGCTGTAGTTTGGGGTCTCGCCGTTCCGGTTCTTGTCTGCGCCGTCCGTCATATCTACGGTGCCGATTTCAATCCGGCCGTCACTCTCGCCTTTGCTGCTACGGGACGATTTCCCCTCAACAGGTACTACCAGCTTGTATTAATCAGGTGGTGGCATCCATATTGCGAGTGGGACACTGAGACTCGTTTTCACAGGAAGCCATGGCCACTTGGCAGGAGCACAACTCTCTGGGACGCATCTTCAAGGTTTTGCGGTTGA 480 0.5312 MADGASGSNGTCHYAVLNVEDKQHNNEGSCISVSAPFSRKLVAESAGTFFLMFGGEASEVLDEGYGNKLSLPGIAVVWGLAVPVLVCAVRHIYGADFNPAVTLAFAATGRFPLNRYYQLVLIRWWHPYCEWDTETRFHRKPWPLGRSTTLWDASSRFCG 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1921 159 SUPERFAMILY Aquaporin-like 37 119 IPR023271 -
Prci11g1921 159 PRINTS Major intrinsic protein family signature 78 102 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g1921 159 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g1921 159 Gene3D Glycerol uptake facilitator protein. 8 124 IPR023271 -
Prci11g1921 159 PANTHER AQUAPORIN NIP2-1 25 116 IPR034294 -
Prci11g1921 159 Pfam Major intrinsic protein 34 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1921 Prci-Chr11 16247452 16249868 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1921 22 115 Major Intrinsic Protein MIP AT4G18910 51.064 5.26e-27 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1921 K09874 - pcin:129285195 340.502