Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1920 ATGGCTGATACCTCTGCAACTAACGGAACCCACGAGGTTGTTCTGAACGTCAATGACAAATCAAATAATGAAGACTCCGGCATCTCCTTCTCCGTGCCTTTCTTGCAGAAGTTGGTCGCAGAATTCGCGGGGACATACTTTCTGATATTCGCCGGCCAAGCAGCGGTGGTTGTGGACAAAGGCTACGGCAACAAAGTAACGCTTCCTGGGATTTCCATCGTTTGGGGTCTTGTCGTTATGGTTCTTGTCTACTCCGTCGGACACATCTCTGGCGCTCATTTCAATCCTGCCGTCACTCTCGCTTTTGCTTCCACCAAACGTTTCCCCATCAAACAGGTGCCAGCTTATGTATCAGTTCAGGTTCTGGCGTCGACGCTTGCGAGTGGGACTCTGAGACTCATATTTGAAGGAAGCAGAGACCATTTCGCAGGAACATTAGTTTCTGGGACGTATCTTCAGGGCTTTGTGGTTGAGTTCATCATCACCTTCTACCTCATGTTCGTCATTTCTGGTGTGGCCACTGATAACAGAGCGATTGGTGAGCTGGCTGGACTTGCGGTAGGAGCAACCGTGTTACTTAACGTTATGTTTGCCGGGCCGGTGACCGGAGCGTCGATGAACCCGGCGAGAAGCTTAGGGCCAGCGATCGTGTGGCACCAATATAAAGGAATATGGGTGTACATCATAGCTCCGGTGGCCGGAGCAGTGGCCGGAGCTTGGGTGTATAACATCATAAGGTACACAGACAAGCCAATACGTGAGATCACAAAGAGTGCTTCTTTCCTCAAAGCTTCAAACCGTTGTGGTTCCTCCAAGTGA 819 0.5043 MADTSATNGTHEVVLNVNDKSNNEDSGISFSVPFLQKLVAEFAGTYFLIFAGQAAVVVDKGYGNKVTLPGISIVWGLVVMVLVYSVGHISGAHFNPAVTLAFASTKRFPIKQVPAYVSVQVLASTLASGTLRLIFEGSRDHFAGTLVSGTYLQGFVVEFIITFYLMFVISGVATDNRAIGELAGLAVGATVLLNVMFAGPVTGASMNPARSLGPAIVWHQYKGIWVYIIAPVAGAVAGAWVYNIIRYTDKPIREITKSASFLKASNRCGSSK 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1920 272 ProSitePatterns MIP family signature. 93 101 IPR022357 -
Prci11g1920 272 PANTHER AQUAPORIN NIP2-1 22 263 IPR034294 -
Prci11g1920 272 Gene3D Glycerol uptake facilitator protein. 3 257 IPR023271 -
Prci11g1920 272 SUPERFAMILY Aquaporin-like 30 256 IPR023271 -
Prci11g1920 272 PRINTS Major intrinsic protein family signature 188 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g1920 272 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g1920 272 PRINTS Major intrinsic protein family signature 75 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g1920 272 PRINTS Major intrinsic protein family signature 225 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g1920 272 PRINTS Major intrinsic protein family signature 36 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g1920 272 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g1920 272 CDD MIP 36 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g1920 272 NCBIfam MIP family channel protein 40 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g1920 272 Pfam Major intrinsic protein 31 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1920 Prci-Chr11 16212706 16215778 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1920 32 272 Major Intrinsic Protein MIP AT5G37810 59.426 8.93e-101 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1920 K09874 - gmx:100812577 379.407