Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1917 ATGCTGGCAAGGAACTTCTTTGCTTTCCTAATTGTTGCGCTGAGTTCTTTCAGATGGCTCAGATACGCAGAATCAAAACTACCTCAAGTAGAAGTTGATGCTCTTCAAGAAATTCTTAGTACAATGGGTGCCACCTACTGGAAGTTTGATGGCGACTCTTGTCAAATTGAAATGGTGGGTTTGACACCAGTACCGCCCAGTGGATCTCAGAGCAGTATTGGTTGTCAATGCTTTTCTGAAAATGGCACTAATTGTCATGTTGTGAGCATTGTGCTCAAAGGGTATAGCCTTCCTGGTGTGCTTCCACCTCAGCTGGTCAAGCTTCCTTACCTTAAAAAAGTCGATTTTGCTCTCAATTACCTAAATGGTACAATCCCTAAGGAATGGACTTCAATTAATTTATCTTCAATATCTGTTCTTGTGAATCGTTTATCAGGGGAAATTCCTAAGGAGCTGGGAAAGATGACCACTCTAACATACCTGAGCCTTGAATCAAACCAATTTTCTGGTCTTATTCCTCCTGAGCTTGGAAATCTGATTAACCTGCAGACTCTGGTTTTGTCATCCAATAAATTTTCAGGACGCTTACCAGTATCATTTTCGCAATTAAAGAATTTGACAGATTTTAGGATAAATGATAACAATTTCAGTGGAACAATACCTAATTTCATCCAGAATTGGGAACTACTTCAAAGACTAGAAATGCATGGAAGTGGACTTGAGGGGCCCATCCCATCAAACATATCTCTTCTAAGTAATTTACGTCATCTGAAAATTAGTGACATAGGTGGTCCCAGTCAGGATTTTCCTTCCCTAAGCAATATGACAGCACTGATAAAATTGGTTTTAAGAAATTGCAATATTACTGGAGAGCTACCTGCCTACGTCTGGACAATGCAGGACTTAGAAATGCTGGATGTCAGTTTTAATAAGTTAGTTGGGGAATTTCCAGCAACTGTCAATTCAAAGCATCTGAAATTTGTGTTTTTGACTGGCAACATGCTAAGTGGAAATATACCAGACTCAATCTTGAAGGCTGGAAGCAACATTGATCTTTCTTACAACAATTTTACCCTAAGTCATGAGCAATCTGCTTGTCAAGATAACCTGAATTTAAACCTAAATTTGTTTCAGAGCTCCTCAGGGCCCAACGATTTAAGGAGAGCTCTGCCGTGCACGAAGAATTTCAATTGTCCAAGATATTCAACTTGTTTGCATGTTAATAGTGGCGGAAAGGATGTAACTATGATGGAAAATAAAGAACATTTGCTCTACATAGGAGATGGAGATGTGTTGGGCGGTACAGCAAAATTTTATTATGATTCCAATAATAACTGGGGTTTCAGTAGCACTGGGGACTTCATGGATGACAATGACTTTCTGAATACACGTTACACTGTGTTTCTGGAATCCTCAAATGTACCTAATATATATGCAACTGCACGTATCTCCCCAATTTCACTGACTTATTTTCACTATTGCTTGGAAAATGGAAACTATACTGTAAATCTACACTTCGCAGAGATACAATTTTCAAATGATAAGACATATGATAGTCTTGGGAAGCGGATATTTGACATCTATGTTCAGGGAAAATTAGTTTGGAAGGATTTCAACATTGAAGATGAAGCGCATGTTGCCCAAAAGCCAATTAAAATACCAATATATAATGTTAATGTAACAGATAATGCCTTGGATATACGATTCTATTGGGCTGGCAAAGGGACTACAAGAATTCCTAGCAGTGGAGTTTATGGTCCCCTTATATCAGCTTTATCTGTTGTTTCTGAGTCTAAACGTTGCTCAGATGGCCTTAAAAGGGGAAATGCTAATATAATAATTGGAGTTGCAGTTGGAGTGGGGGCTATTTGCTTAATACTTGTAATAGTTGGACTCTTTTGGTGGAGAAGCCAATTCAGAGGAAACTCTGGGAGTGATAAAGGTGCCCAAGGACTAGATTCCCATATAGGAACATATAGCCTAAAACAGATAAGAGATGCCACTGACGACTTCAGTCCTGAGAACAAGTTAGGAGAAGGAGGTTTTGGTCCTGTCTATAAGGGGCAGTTATCTGATGGTACTTGGGTAGCAGTAAAACAGCTTTCTTCAAAGTCCCGGCAGGGAAACCGTGAATTTTTAAATGAGATAGGCATGATATCTTGTTTGCAACACCCTAATCTTGTAAAGCTTCATGGATGTTGTATTGAAGGGGATCAACTATTGTTGGTTTACGAGTACCTGGAAAATAATAACCTTGCCCGTGCTTTATTTAGCCATAGAGATCAGCTTAAACTTGATTGGCCTACAAGGCTTAAAATCTGTATTGGCATAGCAAAAGGTCTTGCGTTTCTTCATGAAGAATCCATACTCAAGATTGTTCATCGAGATATCAAGGCCACTAATGTGTTATTGGACAGGAATTTAAATCCTAAGATATCTGACTTTGGATTGGCTAGGCTCAATGAAGAGGAGAAGACCCACATTAGCACCCGAGTGGTTGGGACAATAGGATATATGGCTCCAGAATATGCATTATGGGGTTACCTTACATACAAGGCAGATGTTTACAGTTTTGGAGTTGTGGTCTTGGAAATCATTAGTGGGAAGAGCAACAATGATTATATGCCAAGTGATAATTGTGTTTGCCTTTTGGATTGGGCATGCCATTTGCATAAAACTGAAAACATGATACAACTGGTTGATGAAAGGTTGGGATCAGAGGTAAACCATAAAGAAGTTGAAATCATGGTGAAAGTGGCTCTTCTGTGCACTAATGCATCACCATCCCGTAGGCCGACAATGTCTGAGGTTGTGAACATGCTTGAAGGAAGAATAAGCATTCCTGATATTAACCCAGAAGAAAGTGCTAGTGAGGATTTAAGGTTTAAAGCCTTGAGGGACATTCATCAACATAGAGAAAGTCAGAGTATGAGCACAAGTCATACAGAAAATTCAACTGATGCCCTTGTAAATAGCTCTCCCTTGACATCTGACCATGATTTACATGGGATCCGCTCAGAACCTTAA 3027 0.3941 MLARNFFAFLIVALSSFRWLRYAESKLPQVEVDALQEILSTMGATYWKFDGDSCQIEMVGLTPVPPSGSQSSIGCQCFSENGTNCHVVSIVLKGYSLPGVLPPQLVKLPYLKKVDFALNYLNGTIPKEWTSINLSSISVLVNRLSGEIPKELGKMTTLTYLSLESNQFSGLIPPELGNLINLQTLVLSSNKFSGRLPVSFSQLKNLTDFRINDNNFSGTIPNFIQNWELLQRLEMHGSGLEGPIPSNISLLSNLRHLKISDIGGPSQDFPSLSNMTALIKLVLRNCNITGELPAYVWTMQDLEMLDVSFNKLVGEFPATVNSKHLKFVFLTGNMLSGNIPDSILKAGSNIDLSYNNFTLSHEQSACQDNLNLNLNLFQSSSGPNDLRRALPCTKNFNCPRYSTCLHVNSGGKDVTMMENKEHLLYIGDGDVLGGTAKFYYDSNNNWGFSSTGDFMDDNDFLNTRYTVFLESSNVPNIYATARISPISLTYFHYCLENGNYTVNLHFAEIQFSNDKTYDSLGKRIFDIYVQGKLVWKDFNIEDEAHVAQKPIKIPIYNVNVTDNALDIRFYWAGKGTTRIPSSGVYGPLISALSVVSESKRCSDGLKRGNANIIIGVAVGVGAICLILVIVGLFWWRSQFRGNSGSDKGAQGLDSHIGTYSLKQIRDATDDFSPENKLGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIGMISCLQHPNLVKLHGCCIEGDQLLLVYEYLENNNLARALFSHRDQLKLDWPTRLKICIGIAKGLAFLHEESILKIVHRDIKATNVLLDRNLNPKISDFGLARLNEEEKTHISTRVVGTIGYMAPEYALWGYLTYKADVYSFGVVVLEIISGKSNNDYMPSDNCVCLLDWACHLHKTENMIQLVDERLGSEVNHKEVEIMVKVALLCTNASPSRRPTMSEVVNMLEGRISIPDINPEESASEDLRFKALRDIHQHRESQSMSTSHTENSTDALVNSSPLTSDHDLHGIRSEP 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1917 1008 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 640 746 - -
Prci11g1917 1008 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 33 196 - -
Prci11g1917 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 978 - -
Prci11g1917 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 263 - -
Prci11g1917 1008 SUPERFAMILY Protein kinase-like (PK-like) 654 949 IPR011009 -
Prci11g1917 1008 Gene3D Transferase(Phosphotransferase) domain 1 747 956 - -
Prci11g1917 1008 SUPERFAMILY L domain-like 74 358 - -
Prci11g1917 1008 MobiDBLite consensus disorder prediction 970 1008 - -
Prci11g1917 1008 CDD STKc_IRAK 677 943 - -
Prci11g1917 1008 SMART serkin_6 671 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1917 1008 Gene3D Ribonuclease Inhibitor 263 372 IPR032675 -
Prci11g1917 1008 Gene3D Phosphorylase Kinase; domain 1 638 746 - -
Prci11g1917 1008 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 265 385 - -
Prci11g1917 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 792 804 IPR008271 GO:0004672|GO:0006468
Prci11g1917 1008 Pfam Malectin domain 404 592 IPR021720 -
Prci11g1917 1008 MobiDBLite consensus disorder prediction 977 999 - -
Prci11g1917 1008 ProSiteProfiles Protein kinase domain profile. 671 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1917 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 402 597 - -
Prci11g1917 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase 747 953 - -
Prci11g1917 1008 Pfam Protein tyrosine and serine/threonine kinase 674 941 IPR001245 GO:0004672|GO:0006468
Prci11g1917 1008 Gene3D Ribonuclease Inhibitor 45 195 IPR032675 -
Prci11g1917 1008 Gene3D Ribonuclease Inhibitor 196 262 IPR032675 -
Prci11g1917 1008 Gene3D - 401 599 - -
Prci11g1917 1008 SUPERFAMILY Galactose-binding domain-like 435 575 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1917 Prci-Chr11 16178651 16190998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1917 5 836 Receptor kinase-like Gene Family AT1G29750 60.501 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g1917 PK_Tyr_Ser-Thr 6.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1917 - - qsa:O6P43_032037 1468.37