Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1916 ATGCTGGCAAGGAACTTCTTTGCTTTCCTAATTGTTGCGCTGAGTTCTTTCAGATGGCTCAGATACGCAGAATCAAAACTACCTCAAGTAGAAGTTGATGCTCTTCAAGAAATTCTTAGTACAATGGGTGCCACCTACTGGAAGTTTGATGGCGACTCTTGTCAAATTGAAATGGTGGGTTTGACACCAGTACCGCCCAGTGGATCTCAGAGCAGTATTGGTTGTCAATGCTTTTCTGAAAATGGCACTAATTGTCATGTTGTGAGCATTGTGCTCAAAGGGTATAGCCTTCCTGGTGTGCTTCCACCTCAGCTGGTCAAGCTTCCTTACCTTAAAAAAGTCGATTTTGCTCTCAATTACCTAAATGGTACAATCCCTAAGGAATGGACTTCAATTAATTTATCTTCAATATCTGTTCTTGTGAATCGTTTATCAGGGGAAATTCCTAAGGAGCTGGGAAAGATGACCACTCTAACATACCTGAGCCTTGAATCAAACCAATTTTCTGGTCTTATTCCTCCTGAGCTTGGAAATCTGATTAACCTGCAGACTCTGGTTTTGTCATCCAATAAATTTTCAGGACGCTTACCAGTATCATTTTCGCAATTAAAGAATTTGACAGATTTTAGGATAAATGATAACAATTTCAGTGGAACAATACCTAATTTCATCCAGAATTGGGAACTACTTCAAAGACTAGAAATGCATGGAAGTGGACTTGAGGGGCCCATCCCATCAAACATATCTCTTCTAAGTTGGCGACATTTTTATTTGCACAGGAAAATTAGTGACATAGGTGGTCCCAGTCAGGATTTTCCTTCCCTAAGCAATATGACAGCACTGATAAAATTGGTTTTAAGAAATTGCAATATTACTGGAGAGCTACCTGCCTACGTCTGGACAATGCAGGACTTAGAAATGCTGGATGTCAGTTTTAATAAGTTAGTTGGGGAATTTCCAGCAACTGTCAATTCAAAGCATCTGAAATTTGTGTTTTTGACTGGCAACATGCTAAGTGGAAATATACCAGACTCAATCTTGAAGGCTGGAAGCAACATTGATCTTTCTTACAACAATTTTACCCTAAGTCATGAGCAATCTGCTTGTCAAGATAACCTGAATTTAAACCTAAATTTGTTTCAGAGCTCCTCAGGGCCCAACGATTTAAGGAGAGCTCTGCCGTGCACGAAGAATTTCAATTGTCCAAGATATTCAACTTGTTTGCATGTTAATAGTGGCGGAAAGGATGTAACTATGATGGAAAATAAAGAACATTTGCTCTACATAGGAGATGGAGATGTGTTGGGCGGTACAGCAAAATTTTATTATGATTCCAATAATAACTGGGGTTTCAGTAGCACTGGGGACTTCATGGATGACAATGACTTTCTGAATACACGTTACACTGTGTTTCTGGAATCCTCAAATGTACCTAATATATATGCAACTGCACGTATCTCCCCAATTTCACTGACTTATTTTCACTATTGCTTGGAAAATGGAAACTATACTGTAAATCTACACTTCGCAGAGATACAATTTTCAAATGATAAGACATATGATAGTCTTGGGAAGCGGATATTTGACATCTATGTTCAGGGAAAATTAGTTTGGAAGGATTTCAACATTGAAGATGAAGCGCATGTTGCCCAAAAGCCAATTAAAATACCAATATATAATGTTAATGTAACAGATAATGCCTTGGATATACGATTCTATTGGGCTGGCAAAGGGACTACAAGAATTCCTAGCAGTGGAGTTTATGGTCCCCTTATATCAGCTTTATCTGTTGTTTCTGAGTCTAAACGTTGCTCAGATGGCCTTAAAAGGGGAAATGCTAATATAATAATTGGAGTTGCAGTTGGAGTGGGGGCTATTTGCTTAATACTTGTAATAGTTGGACTCTTTTGGTGGAGAAGCCAATTCAGAGGAAACTCTGGGAGTGATAAAGGTGCCCAAGGACTAGATTCCCATATAGGAACATATAGCCTAAAACAGATAAGAGATGCCACTGACGACTTCAGTCCTGAGAACAAGTTAGGAGAAGGAGGTTTTGGTCCTGTCTATAAGGGGCAGTTATCTGATGGTACTTGGGTAGCAGTAAAACAGCTTTCTTCAAAGTCCCGGCAGGGAAACCGTGAATTTTTAAATGAGATAGGCATGATATCTTGTTTGCAACACCCTAATCTTGTAAAGCTTCATGGATGTTGTATTGAAGGGGATCAACTATTGTTGGTTTACGAGTACCTGGAAAATAATAACCTTGCCCGTGCTTTATTTAGCCATAGAGATCAGCTTAAACTTGATTGGCCTACAAGGCTTAAAATCTGTATTGGCATAGCAAAAGGTCTTGCGTTTCTTCATGAAGAATCCATACTCAAGATTGTTCATCGAGATATCAAGGCCACTAATGTGTTATTGGACAGGAATTTAAATCCTAAGATATCTGACTTTGGATTGGCTAGGCTCAATGAAGAGGAGAAGACCCACATTAGCACCCGAGTGGTTGGGACAATAGGATATATGGCTCCAGAATATGCATTATGGGGTTACCTTACATACAAGGCAGATGTTTACAGTTTTGGAGTTGTGGTCTTGGAAATCATTAGTGGGAAGAGCAACAATGATTATATGCCAAGTGATAATTGTGTTTGCCTTTTGGATTGGGCATGCCATTTGCATAAAACTGAAAACATGATACAACTGGTTGATGAAAGGTTGGGATCAGAGGTAAACCATAAAGAAGTTGAAATCATGGTGAAAGTGGCTCTTCTGTGCACTAATGCATCACCATCCCGTAGGCCGACAATGTCTGAGGTTGTGAACATGCTTGAAGGAAGAATAAGCATTCCTGATATTAACCCAGAAGAAAGTGCTAGTGAGGATTTAAGGTTTAAAGCCTTGAGGGACATTCATCAACATAGAGAAAGTCAGAGTATGAGCACAAGTCATACAGAAAATTCAACTGATGCCCTTGTAAATAGCTCTCCCTTGACATCTGACCATGATTTACATGGGATCCGCTCAGAACCTTAA 3036 0.3946 MLARNFFAFLIVALSSFRWLRYAESKLPQVEVDALQEILSTMGATYWKFDGDSCQIEMVGLTPVPPSGSQSSIGCQCFSENGTNCHVVSIVLKGYSLPGVLPPQLVKLPYLKKVDFALNYLNGTIPKEWTSINLSSISVLVNRLSGEIPKELGKMTTLTYLSLESNQFSGLIPPELGNLINLQTLVLSSNKFSGRLPVSFSQLKNLTDFRINDNNFSGTIPNFIQNWELLQRLEMHGSGLEGPIPSNISLLSWRHFYLHRKISDIGGPSQDFPSLSNMTALIKLVLRNCNITGELPAYVWTMQDLEMLDVSFNKLVGEFPATVNSKHLKFVFLTGNMLSGNIPDSILKAGSNIDLSYNNFTLSHEQSACQDNLNLNLNLFQSSSGPNDLRRALPCTKNFNCPRYSTCLHVNSGGKDVTMMENKEHLLYIGDGDVLGGTAKFYYDSNNNWGFSSTGDFMDDNDFLNTRYTVFLESSNVPNIYATARISPISLTYFHYCLENGNYTVNLHFAEIQFSNDKTYDSLGKRIFDIYVQGKLVWKDFNIEDEAHVAQKPIKIPIYNVNVTDNALDIRFYWAGKGTTRIPSSGVYGPLISALSVVSESKRCSDGLKRGNANIIIGVAVGVGAICLILVIVGLFWWRSQFRGNSGSDKGAQGLDSHIGTYSLKQIRDATDDFSPENKLGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNREFLNEIGMISCLQHPNLVKLHGCCIEGDQLLLVYEYLENNNLARALFSHRDQLKLDWPTRLKICIGIAKGLAFLHEESILKIVHRDIKATNVLLDRNLNPKISDFGLARLNEEEKTHISTRVVGTIGYMAPEYALWGYLTYKADVYSFGVVVLEIISGKSNNDYMPSDNCVCLLDWACHLHKTENMIQLVDERLGSEVNHKEVEIMVKVALLCTNASPSRRPTMSEVVNMLEGRISIPDINPEESASEDLRFKALRDIHQHRESQSMSTSHTENSTDALVNSSPLTSDHDLHGIRSEP 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1916 1011 MobiDBLite consensus disorder prediction 973 1011 - -
Prci11g1916 1011 Pfam Protein tyrosine and serine/threonine kinase 677 944 IPR001245 GO:0004672|GO:0006468
Prci11g1916 1011 Gene3D Transferase(Phosphotransferase) domain 1 750 959 - -
Prci11g1916 1011 CDD STKc_IRAK 680 946 - -
Prci11g1916 1011 Gene3D Ribonuclease Inhibitor 197 258 IPR032675 -
Prci11g1916 1011 Gene3D Ribonuclease Inhibitor 259 375 IPR032675 -
Prci11g1916 1011 SUPERFAMILY Protein kinase-like (PK-like) 657 952 IPR011009 -
Prci11g1916 1011 Gene3D - 404 602 - -
Prci11g1916 1011 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 643 749 - -
Prci11g1916 1011 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 33 196 - -
Prci11g1916 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Prci11g1916 1011 MobiDBLite consensus disorder prediction 980 1002 - -
Prci11g1916 1011 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 405 600 - -
Prci11g1916 1011 SMART serkin_6 674 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1916 1011 SUPERFAMILY L domain-like 74 380 - -
Prci11g1916 1011 FunFam Putative LRR receptor-like serine/threonine-protein kinase 750 956 - -
Prci11g1916 1011 Gene3D Phosphorylase Kinase; domain 1 641 749 - -
Prci11g1916 1011 Gene3D Ribonuclease Inhibitor 44 196 IPR032675 -
Prci11g1916 1011 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 266 - -
Prci11g1916 1011 ProSiteProfiles Protein kinase domain profile. 674 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1916 1011 Pfam Malectin domain 407 595 IPR021720 -
Prci11g1916 1011 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 268 388 - -
Prci11g1916 1011 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 981 - -
Prci11g1916 1011 SUPERFAMILY Galactose-binding domain-like 438 578 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1916 Prci-Chr11 16178651 16190999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1916 5 839 Receptor kinase-like Gene Family AT1G29750 59.929 0.0 1018
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g1916 PK_Tyr_Ser-Thr 6.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1916 - - qsa:O6P43_032037 1459.89