Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1906 ATGGGCTTTCGTTTGCCAGGAATGAGAAGAGCTTCATTTGCTACAAAAGTGGCATTTTCAAAATCTAGTGAAGTCCCAAAGGGATATCTAGCGGTATATGTTGGAGAGAAAATGAAGAGGTATGTAATCCCCATATCATACTTGAATCAACCTTCATTTCAAGAGTTGCTAAGCCAAGCTGAAGAAGAATTCGGGTATGATCATCCAATGGGTGCCCTTACTATTCCTTGCAGAGAAGATGTCTTCCTAAATCACAATTTTAAAATGGGCTTTCATTTACCCGGAATGAGAAGGGCTTCATTTGCCAGAAAAGTGGCTTCTTTAAAATCAAATGAAGTGCCAAAGGGATATCTTGCAGTCTATATTGGAGAGAAAATGAAGAGGTTTGTAATCCCCATATCATATTTGAGTCAACCTTCATTTCAAGGATTGTTAAGCCAAGCTGAGGAAGAGTATAGATATGATCATCCAATGGGGGCTCTCATTATTCCTTGCAGAGAAGATGTCTTCCTCAATGTCACTTCTTCTTTTGATAGGTGCTAA 543 0.3904 MGFRLPGMRRASFATKVAFSKSSEVPKGYLAVYVGEKMKRYVIPISYLNQPSFQELLSQAEEEFGYDHPMGALTIPCREDVFLNHNFKMGFHLPGMRRASFARKVASLKSNEVPKGYLAVYIGEKMKRFVIPISYLSQPSFQGLLSQAEEEYRYDHPMGALIIPCREDVFLNVTSSFDRC 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1906 180 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 85 IPR003676 GO:0009733
Prci11g1906 180 Pfam Auxin responsive protein 97 175 IPR003676 GO:0009733
Prci11g1906 180 Pfam Auxin responsive protein 12 83 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1906 Prci-Chr11 15988905 15991096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1906 24 82 Calmodulin-binding Proteins AT3G43120 55.932 1.08e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1906 - K14488 pcin:129286196 286.96