Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1903 ATGGGCTTTCGTTTTCCAGGAATGAGAAGAGCTTCATTTGCTACAAAAGTGGCTTTTTCAAAATCTAGTGAAGTCCCAAAGGGATATCTAGCGGTATATGTTGGAGAGAAAATGAAGAGGTTTGTAATCCCCATATCATACTTGAATCAACCTTCATTTCAAGAGTTGCTAAGCCAAGCTGAAGAAGAATTCAGGTATGATCATCCAATGGGTGCCCTTACTATTCCTTGCAGAGAAGATGTCTTCCTAAATCACAATTTTAAAATGGGCTTTCATTTACCCGGAATGAGAAGGGCTTTATTTGCTAGAAAAGTGGCTTCTTTAAAATCGAATGAAGTGCCAAAGGGATATCTTGCAATCTATATTGGAGAGGAAATGAAGAGGTTTGCAATCCCCATATCATACTTGAGTCAACCTTCATTTCAAGGATTGTTAAGCCAAGCTGAGGAAGAGTATAGATATGATCATCCAATGGGCGCTCTCACTATTCCTTGCAGAGAAGATGTCTGCCTCAATGTCACTTCTTCTTTTGATAGGTGCTAA 543 0.3923 MGFRFPGMRRASFATKVAFSKSSEVPKGYLAVYVGEKMKRFVIPISYLNQPSFQELLSQAEEEFRYDHPMGALTIPCREDVFLNHNFKMGFHLPGMRRALFARKVASLKSNEVPKGYLAIYIGEEMKRFAIPISYLSQPSFQGLLSQAEEEYRYDHPMGALTIPCREDVCLNVTSSFDRC 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1903 180 Pfam Auxin responsive protein 13 83 IPR003676 GO:0009733
Prci11g1903 180 Pfam Auxin responsive protein 105 174 IPR003676 GO:0009733
Prci11g1903 180 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1903 Prci-Chr11 15943635 15945830 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1903 24 82 Calmodulin-binding Proteins AT3G43120 55.932 6.63e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1903 - K14488 pcin:129286196 280.026