Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1901 ATGTCGCAGGACTGGATTGTACCTTTAGCTAATCCTACCATCAATATCATGTGGTCCAAGTCCTCTCTTCATTTGGCTCGTCCTGACTTGTTGCTTATTGAAGAAGACCTCTCTAAGACACAACCATGTTTTCGTTTACCTAGAATTAGAAGGGCTTCAATTGCTGCAAAAATGGCTTCTTCAAAATCAGGTAAAGTACCAAAGGGATATCTTGTAGTCTATGTTGGAGAGGAAATGAAGAGGTTTGCGATCCCAATATCATATTTGAATCAACCTTCATTTCAAGAGTTGTTAAGCCAAGCTGAGGAAGAGTATGGATATGATCATCCAATGGGTGCTCTCACTATTCCTTGCAATGAATATGTCTTTCTCAATCACAAGAAAATGGGTTTTCGTTTACCTGGGATTAGAAGGGCTTCAATCACTACAAAAATGGTTTCTTCAAAATCAGGTGAAGTACCAAAGGGATATCTTGCTGTATACGTTGGAGAGGAAATAAAGAGGTTTGTGATCCCTATTTCATATTTGAATCAGCCTTCATTTCAAGAGTTATTAAGCCAAGTTGAAGAAGAGTATGGATATGATCATCCAATGGGTGCGCTTACTATTCCTTGCAGAGAAGATGTCTTTTTTAGCGTTACATCTTCTTTCAATAGGTGCTAG 663 0.3861 MSQDWIVPLANPTINIMWSKSSLHLARPDLLLIEEDLSKTQPCFRLPRIRRASIAAKMASSKSGKVPKGYLVVYVGEEMKRFAIPISYLNQPSFQELLSQAEEEYGYDHPMGALTIPCNEYVFLNHKKMGFRLPGIRRASITTKMVSSKSGEVPKGYLAVYVGEEIKRFVIPISYLNQPSFQELLSQVEEEYGYDHPMGALTIPCREDVFFSVTSSFNRC 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1901 220 Pfam Auxin responsive protein 138 215 IPR003676 GO:0009733
Prci11g1901 220 Pfam Auxin responsive protein 51 124 IPR003676 GO:0009733
Prci11g1901 220 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 145 216 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1901 Prci-Chr11 15922460 15929793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1901 152 210 Calmodulin-binding Proteins AT3G43120 59.322 1.63e-18 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1901 - K14488 pcin:129286196 430.639