Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1897 ATGGGTTTTCGTTTTCCTCGAATGATCAAGAGAACTTCAATTGCTTCCAAACCTTCTTCAAAATTTGGTGAAGTACCAAAGGGACATCTTGCGGTATATGTTGGAGAGAAGATGAAGAGGTTCATAATTCCTATATCATACTTGAGCCAACCTTCATTTCAAGAATTGTTATGTCAAGCTGAGGAAGAATTTGGGTATGACCATCCAATGGGAGCTCTTACTATTCCTTGTACAGAAGACATCTTCCTACATGTCACTTCTTCTGTCAATGGATTCTAA 279 0.3835 MGFRFPRMIKRTSIASKPSSKFGEVPKGHLAVYVGEKMKRFIIPISYLSQPSFQELLCQAEEEFGYDHPMGALTIPCTEDIFLHVTSSVNGF 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1897 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 88 IPR003676 GO:0009733
Prci11g1897 92 Pfam Auxin responsive protein 13 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1897 Prci-Chr11 15850528 15851066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1897 24 85 Calmodulin-binding Proteins AT5G20810 59.677 8.68e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1897 K14488 - gmx:100500483 138.272