Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1879 ATGCCTCGTAAGGTGAATTATGAACTTGATTATGATGATGATTACGATGACTATGAAGACTATGAATATGATGTTGAAATAGAAGAACATGGAGAAAGACCTGAACCTAACAAAAAACAAGAGGCCAAAAGACTTTGGAGATGCTCTATTTGCACTTACGACAACGAAGAGGGCATGAATGTATGTGATATCTGTGGTGTTGTGCGTCATCCTTTGGTTAACGTAGGAGCTTCTGACAATAACAAAACAGCCCCTTTCAAGTTTGATGTTCCATCCCCAGATGATGTAGTTTCTACTGGACTGCAGTCTTCCAAAATGGGATTGAAAGGCACAGTTACTGACGCTAAAAGTTCTCGCGTTCCATCCAGTATTACACAGAATAATGAACTGAAAGTGCAGTCAAATGGTGAAAGTTTTGATTACTCATCATCTTTGGTTCAGAAGGGCAGACAGGATAGTTTTGCTGAGAGCAAGCCTTCTAGAGACGTGGCATTTAATCTGAAAACAAGTAATAAAACTTCAGGCAGCTTGCCAGCATCTTCTGCAAAGGGCAAAGGTAAAATGAGTGAAATCAAGTCTTCCAATGATCGCAAAATTGACATTCAATCCAGTGAAGAATTGTCAGATAGTTTGTCTGCACTGATGAAAGTTGGAGACAGTGGTAGTGAAATTTATTGCTCTTCTAGCAAAGATGTCAGACCTGAAAGTAGTTCTGAGAACATGGCTGTTGATGTAAGAACTAGAAAGTCAGATAATACTATTTCTAAAAGATCTCATCCACAAATGCCTTACAAACCAGAAGAATGGGTGCTCCCTCAACAAGATGAAGATACATTGACGCAGTTGAATCTTGCAGTTGTTGGTCATGTTGATTCTGGGAAGTCAACGCTCTCAGGTAGACTATTACACTTGTTGGGACGAATTACTCAAAAAGAAATGCACAAATATGAAAAGGAGTCCAAATTACAGGGTAAAGGATCCTTTGCCTATGCTTGGGCACTGGATGAAAGTTCTGAAGAAAGGGAAAGGGGAATAACTATGACAGTTGCTGTTGCATATTTTGACACTAAGAAATATCATGTCGTTGTGCTTGACTCCCCGGGCCATAAAGATTTTGTTCCAAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAATTCTTGTTATTGATGCATCAGTTGGTGCATATGAAGCAGGCATGGATAGTAGCAAAGGACAAACAAGGGAGCATGCACAGCTTATCAGAAGTTTTGGTGTTGGCCAGGTTATTGTTGCAATAAATAAGATGGATGCTGTGGGATACTCTAAAGATCGGTTTGAGTTAATTAGACATCAATTGGGAGTGTTTCTTCGGACATGTGGTTTTAAAGACTCTTCAATATCATGGATTCCCTTAAGTGTCATAGAAAATCAAAATTTGGTGTCATCTCCTTCTGATGTTCGTTTCAAATCCTGGTATAAAGGACCCTATCTGTTAGATGCTATTGATTCGCTCCAACCTCCAACTAGAGAATTATCAAAGCCTCTACTAATGCCAATATGTGATGTTATCAAGTCACCCACGCTTGGACAGGTCTCTGCTTGTGGTAAATTAGAAGCTGGAGCTCTTCGGATTGGATCAAAGGTCTTAGTTATGCCTTCAGCTGTTTTGGGGACAGTTCGCGCATTGGAGCGTGATTCTAATGCCTGCACTATTGCAAGAGCTGGAGATAATGTAGCTGTCACGTTGAATGGTGTAGATGCAAGTCATGTAATGTCAGGAGGAGTATTATGCCACCCTGATTTTCCTGTTGCAATTGCAAGTCATTTGGAGTTGAAGGTGCTTGTGTTGGAAGGTGCAAATCCCATATTGGTAGGATCGCAGTTAGAGTTTCATATACACCACGCCAAAGAGCCTGCTAAAGTGTCAAGCATATTGTCAGTACTTGATCCAAAGACTGGGAAGGTGACAAAAAAGTCCCCTCGCTGTCTCATTGCAAAGCAGAGTGCGGTAGTTGAGGTAATTTTGCAAGAGCCAGTCTGTGTGGTAGAATCATCTATCTGTAAAGCTCTTGGAAGGGTGTCTCTAAGAGCATTAGGAAGAACAATTGCTGTTGGACTTGTTACCCGAATAATTGGAGAGCAAGATTAA 2133 0.4088 MPRKVNYELDYDDDYDDYEDYEYDVEIEEHGERPEPNKKQEAKRLWRCSICTYDNEEGMNVCDICGVVRHPLVNVGASDNNKTAPFKFDVPSPDDVVSTGLQSSKMGLKGTVTDAKSSRVPSSITQNNELKVQSNGESFDYSSSLVQKGRQDSFAESKPSRDVAFNLKTSNKTSGSLPASSAKGKGKMSEIKSSNDRKIDIQSSEELSDSLSALMKVGDSGSEIYCSSSKDVRPESSSENMAVDVRTRKSDNTISKRSHPQMPYKPEEWVLPQQDEDTLTQLNLAVVGHVDSGKSTLSGRLLHLLGRITQKEMHKYEKESKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASVGAYEAGMDSSKGQTREHAQLIRSFGVGQVIVAINKMDAVGYSKDRFELIRHQLGVFLRTCGFKDSSISWIPLSVIENQNLVSSPSDVRFKSWYKGPYLLDAIDSLQPPTRELSKPLLMPICDVIKSPTLGQVSACGKLEAGALRIGSKVLVMPSAVLGTVRALERDSNACTIARAGDNVAVTLNGVDASHVMSGGVLCHPDFPVAIASHLELKVLVLEGANPILVGSQLEFHIHHAKEPAKVSSILSVLDPKTGKVTKKSPRCLIAKQSAVVEVILQEPVCVVESSICKALGRVSLRALGRTIAVGLVTRIIGEQD 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1879 710 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 279 507 IPR000795 GO:0003924|GO:0005525
Prci11g1879 710 MobiDBLite consensus disorder prediction 166 180 - -
Prci11g1879 710 ProSitePatterns Zinc finger RanBP2-type signature. 46 65 IPR001876 -
Prci11g1879 710 FunFam elongation factor 1-alpha isoform X4 600 709 - -
Prci11g1879 710 SUPERFAMILY Ran binding protein zinc finger-like 43 69 IPR036443 -
Prci11g1879 710 MobiDBLite consensus disorder prediction 110 131 - -
Prci11g1879 710 Pfam Elongation factor Tu GTP binding domain 282 498 IPR000795 GO:0003924|GO:0005525
Prci11g1879 710 PRINTS GTP-binding elongation factor signature 342 350 IPR000795 GO:0003924|GO:0005525
Prci11g1879 710 PRINTS GTP-binding elongation factor signature 283 296 IPR000795 GO:0003924|GO:0005525
Prci11g1879 710 PRINTS GTP-binding elongation factor signature 362 372 IPR000795 GO:0003924|GO:0005525
Prci11g1879 710 PRINTS GTP-binding elongation factor signature 423 432 IPR000795 GO:0003924|GO:0005525
Prci11g1879 710 PRINTS GTP-binding elongation factor signature 378 389 IPR000795 GO:0003924|GO:0005525
Prci11g1879 710 SUPERFAMILY Translation proteins 501 596 IPR009000 -
Prci11g1879 710 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 603 706 IPR009001 -
Prci11g1879 710 MobiDBLite consensus disorder prediction 166 201 - -
Prci11g1879 710 CDD EF1_alpha 283 502 - -
Prci11g1879 710 FunFam Elongation factor 1 alpha-like protein 271 503 - -
Prci11g1879 710 CDD HBS1_C_III 597 705 - -
Prci11g1879 710 Gene3D Translation factors 507 596 - -
Prci11g1879 710 FunFam Translation elongation factor EF-1 506 596 - -
Prci11g1879 710 Pfam Elongation factor Tu C-terminal domain 603 705 IPR004160 -
Prci11g1879 710 Gene3D Translation factors 600 709 - -
Prci11g1879 710 PANTHER TRANSLATION FACTOR 276 705 - -
Prci11g1879 710 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 281 524 IPR027417 -
Prci11g1879 710 Gene3D - 271 503 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1879 Prci-Chr11 15706618 15715301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1879 45 706 Eukaryotic Initiation Factors Gene Family AT5G10630 61.027 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1879 K14416 - gmx:100798594 1007.28