Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1874 ATGCCTCGTAAGGTGAATTATGAACTTGATTATGATGATGATTACGATGACTATGAAGACTATGAATATGATGTTGAAATAGAAGAACATGGAGAAAGACCTGAACCTAACAAAAAACAAGAGGCCAAAAGACTTTGGAGATGCTCTATTTGCACTTACGACAACGAAGAGGGCATGAATGTATGTGATATCTGTGGTGTTGTGCGTCATCCTTTGGTTAACGTAGGAGCTTCTGACAATAACAAAACAGTTAAAGGCATATGCAAAAATTCTGGAGTATCCAAATTGGCCAAGTCTCTTTTTGCATCACTGCCACAACCGTTGCCCAAAGAGGGCTTGTTATTTCTTAAGAAGGATGATGGCTTTCTGACAGAAGATGGCAATAGCTACAAGCTTGGGAATGCCCAAGGAGAATTTTATGAATTTCATAAGTCTTTTATTACTCAAAGACATCACCATCTAAACATAGCCCCTTTCAAGTTTGATGTTCCATCCCCAGATGATGTAGTTTCTACTGGACTGCAGTCTTCCAAAATGGGATTGAAAGGCACAGTTACTGACGCTAAAAGTTCTCGCGTTCCATCCAGTATTACACAGAATAATGAACTGAAAGTGCAGTCAAATGGTGAAAGTTTTGATTACTCATCATCTTTGGTTCAGAAGGGCAGACAGGATAGTTTTGCTGAGAGCAAGCCTTCTAGAGACGTGGCATTTAATCTGAAAACAAGTAATAAAACTTCAGGCAGCTTGCCAGCATCTTCTGCAAAGGGCAAAGGTAAAATGAGTGAAATCAAGTCTTCCAATGATCGCAAAATTGACATTCAATCCAGTGAAGAATTGTCAGATAGTTTGTCTGCACTGATGAAAGTTGGAGACAGTGGTAGTGAAATTTATTGCTCTTCTAGCAAAGATGTCAGACCTGAAAGTAGTTCTGAGAACATGGCTGTTGATGTAAGAACTAGAAAGTCAGATAATACTATTTCTAAAAGATCTCATCCACAAATGCCTTACAAACCAGAAGAATGGGTGCTCCCTCAACAAGATGAAGATACATTGACGCAGTTGAATCTTGCAGTTGTTGGTCATGTTGATTCTGGGAAGTCAACGCTCTCAGGTAGACTATTACACTTGTTGGGACGAATTACTCAAAAAGAAATGCACAAATATGAAAAGGAGTCCAAATTACAGGGTAAAGGATCCTTTGCCTATGCTTGGGCACTGGATGAAAGTTCTGAAGAAAGGGAAAGGGGAATAACTATGACAGTTGCTGTTGCATATTTTGACACTAAGAAATATCATGTCGTTGTGCTTGACTCCCCGGGCCATAAAGATTTTGTTCCAAACATGATTTCTGGGGCAACACAAGCTGATGCTGCAATTCTTGTTATTGATGCATCAGTTGGTGCATATGAAGCAGGCATGGATAGTAGCAAAGGACAAACAAGGGAGCATGCACAGCTTATCAGAAGTTTTGGTGTTGGCCAGGTTATTGTTGCAATAAATAAGATGGATGCTGTGGGATACTCTAAAGATCGGTTTGAGTTAATTAGACATCAATTGGGAGTGTTTCTTCGGACATGTGGTTTTAAAGACTCTTCAATATCATGGATTCCCTTAAGTGTCATAGAAAATCAAAATTTGGTGTCATCTCCTTCTGATGTTCGTTTCAAATCCTGGTATAAAGGACCCTATCTGTTAGATGCTATTGATTCGCTCCAACCTCCAACTAGAGAATTATCAAAGCCTCTACTAATGCCAATATGTGATGTTATCAAGTCACCCACGCTTGGACAGGTCTCTGCTTGTGGTAAATTAGAAGCTGGAGCTCTTCGGATTGGATCAAAGGTCTTAGTTATGCCTTCAGCTGTTTTGGGGACAGTTCGCGCATTGGAGCGTGATTCTAATGCCTGCACTATTGCAAGAGCTGGAGATAATGTAGCTGTCACGTTGAATGGTGTAGATGCAAGTCATGTAATGTCAGGAGGAGTATTATGCCACCCTGATTTTCCTGTTGCAATTGCAAGTCATTTGGAGTTGAAGGTGCTTGTGTTGGAAGGTGCAAATCCCATATTGGTAGGATCGCAGTTAGAGTTTCATATACACCACGCCAAAGAGCCTGCTAAAGTGTCAAGCATATTGTCAGTACTTGATCCAAAGACTGGGAAGGTGACAAAAAAGTCCCCTCGCTGTCTCATTGCAAAGCAGAGTGCGGTAGTTGAGGTAATTTTGCAAGAGCCAGTCTGTGTGGTAGAATCATCTATCTGTAAAGCTCTTGGAAGGGTGTCTCTAAGAGCATTAGGAAGAACAATTGCTGTTGGACTTGTTACCCGAATAATTGGAGAGCAAGATTAA 2352 0.4065 MPRKVNYELDYDDDYDDYEDYEYDVEIEEHGERPEPNKKQEAKRLWRCSICTYDNEEGMNVCDICGVVRHPLVNVGASDNNKTVKGICKNSGVSKLAKSLFASLPQPLPKEGLLFLKKDDGFLTEDGNSYKLGNAQGEFYEFHKSFITQRHHHLNIAPFKFDVPSPDDVVSTGLQSSKMGLKGTVTDAKSSRVPSSITQNNELKVQSNGESFDYSSSLVQKGRQDSFAESKPSRDVAFNLKTSNKTSGSLPASSAKGKGKMSEIKSSNDRKIDIQSSEELSDSLSALMKVGDSGSEIYCSSSKDVRPESSSENMAVDVRTRKSDNTISKRSHPQMPYKPEEWVLPQQDEDTLTQLNLAVVGHVDSGKSTLSGRLLHLLGRITQKEMHKYEKESKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASVGAYEAGMDSSKGQTREHAQLIRSFGVGQVIVAINKMDAVGYSKDRFELIRHQLGVFLRTCGFKDSSISWIPLSVIENQNLVSSPSDVRFKSWYKGPYLLDAIDSLQPPTRELSKPLLMPICDVIKSPTLGQVSACGKLEAGALRIGSKVLVMPSAVLGTVRALERDSNACTIARAGDNVAVTLNGVDASHVMSGGVLCHPDFPVAIASHLELKVLVLEGANPILVGSQLEFHIHHAKEPAKVSSILSVLDPKTGKVTKKSPRCLIAKQSAVVEVILQEPVCVVESSICKALGRVSLRALGRTIAVGLVTRIIGEQD 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1874 783 Gene3D Translation factors 673 782 - -
Prci11g1874 783 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 352 580 IPR000795 GO:0003924|GO:0005525
Prci11g1874 783 Gene3D - 344 576 IPR027417 -
Prci11g1874 783 SUPERFAMILY Ran binding protein zinc finger-like 43 69 IPR036443 -
Prci11g1874 783 ProSitePatterns Zinc finger RanBP2-type signature. 46 65 IPR001876 -
Prci11g1874 783 Pfam Elongation factor Tu C-terminal domain 676 778 IPR004160 -
Prci11g1874 783 MobiDBLite consensus disorder prediction 181 204 - -
Prci11g1874 783 FunFam Translation elongation factor EF-1 579 669 - -
Prci11g1874 783 FunFam Elongation factor 1 alpha-like protein 344 576 - -
Prci11g1874 783 MobiDBLite consensus disorder prediction 238 277 - -
Prci11g1874 783 MobiDBLite consensus disorder prediction 238 253 - -
Prci11g1874 783 PANTHER TRANSLATION FACTOR 349 778 - -
Prci11g1874 783 MobiDBLite consensus disorder prediction 262 277 - -
Prci11g1874 783 FunFam elongation factor 1-alpha isoform X4 673 782 - -
Prci11g1874 783 Pfam Elongation factor Tu GTP binding domain 355 571 IPR000795 GO:0003924|GO:0005525
Prci11g1874 783 SUPERFAMILY Translation proteins 574 669 IPR009000 -
Prci11g1874 783 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 597 IPR027417 -
Prci11g1874 783 Gene3D Translation factors 580 669 - -
Prci11g1874 783 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 676 779 IPR009001 -
Prci11g1874 783 CDD HBS1_C_III 670 778 - -
Prci11g1874 783 PRINTS GTP-binding elongation factor signature 415 423 IPR000795 GO:0003924|GO:0005525
Prci11g1874 783 PRINTS GTP-binding elongation factor signature 435 445 IPR000795 GO:0003924|GO:0005525
Prci11g1874 783 PRINTS GTP-binding elongation factor signature 451 462 IPR000795 GO:0003924|GO:0005525
Prci11g1874 783 PRINTS GTP-binding elongation factor signature 356 369 IPR000795 GO:0003924|GO:0005525
Prci11g1874 783 PRINTS GTP-binding elongation factor signature 496 505 IPR000795 GO:0003924|GO:0005525
Prci11g1874 783 CDD EF1_alpha 356 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1874 Prci-Chr11 15706618 15715962 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1874 155 779 Eukaryotic Initiation Factors Gene Family AT5G10630 60.800 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1874 K14416 - gmx:100801724 1100.5