Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1849 ATGGCCGTGCCGCTTCTTGCAAAGAAGATCGTAAAGAAGAGGGTCAAGAAGTTCAAGAGGCCTCAGAGCGACCGCAAGATCTCTGTCAAGGAAAACTGGCGCAGGCCAAAGGGTATTGATTCTCGCGTCAGGAGAAAGTTCAAGGGATGCACTTTGATGCCAAACATTGGCTATGGCTCAGACAAGAAAACCCGGCACTATCTCCCAAACGGTTTCAAGAAATTTGTTGTGAACAACGTCAAAGAGTTGGAACTACTTATGATGCACAACAGGACATACTGTGCTGAGGTTGCTCACAATGTGTCCACAAGAAAGAGAAAGGAGATAATTGAGAGAGCTGCTCAACTTGACGTTGTTGTGACCAACAGAACAGCGAGACTACGTAGCCAGGAGGATGAATAG 402 0.4677 MAVPLLAKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVNNVKELELLMMHNRTYCAEVAHNVSTRKRKEIIERAAQLDVVVTNRTARLRSQEDE 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1849 133 SMART Ribosomal_L32e_2 15 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Prci11g1849 133 CDD Ribosomal_L32_L32e 22 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
Prci11g1849 133 SUPERFAMILY Ribosomal protein L32e 2 131 IPR036351 -
Prci11g1849 133 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 133 IPR001515 GO:0003735|GO:0005840|GO:0006412
Prci11g1849 133 Pfam Ribosomal protein L32 16 122 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1849 Prci-Chr11 15467024 15469427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1849 1 133 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 85.714 2.00e-85 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1849 K02912 - qsa:O6P43_032077 248.44