Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1826 ATGAGAACAGACGAACAGAAGATCAGAGGGAGGAGAGGGCGAGGACGCTTGCTCTCTGTTCTGTCCGCACCAATGTCTATTTATAGGCTGAGGAATGAGACACAAACGTTGGACAAAACATTAACGCACAGAATTCAGTTTCCAGAAAACTGCCAACGCCTCAGTTTCAACTTGAAAACTGCTAAATCAAAGGTTTTTCGGGGCAAAAGATCCTCTCCGTATGCTTGGATATTAGATCAAACTTCTGAAGAAAGGGAAAGAGGAAAATCAATGACAGTTGCTGTTGCATTTTTTCAATCAACAAAATACAACATTGTTTTGCTTGACTCTCCTGGCCTTGGAGATTTTGTCCCGAACATGATTTCTGGGACAGCACAAAGTGATGCGGCAATTCTTGTGATTGACGCATCAGTTGGTGCGTATGAAGTTGGCATGGACAACAGCAAGGGACAAACTTGGGAGCATGCCCTGCTTATCAGAAGTTTTGGCATCGACCAGCTTATTGTTGCAATAACTAAGATGGATGCTGTAGGATACTCTAAAGATCGATTTGAGTTTATTAGACAGCAATTGGGAGTGTTTCTCCGGACAAGTCGTTTTAAAGACTCTTCGGGATCATGGATTCCCTTGAGTGTCACAGAAAATCAAAATCTGGTGTCATCTCCTTCTGATGTTCGTTTCAAATGCTGGTATAAAGGCCGCTATCTGCTAGATGCAATTGATTCGCTCCAACCTCCAACTAGAGAATTCTCAAAGCCTCTACTGATGCCAATATGTGATGTTATCAAGTCACCCACGCGTGGACAGGTCTCTGCTTGTGGCAAATTAGAAGCTGGAGCTCTTCGGATTGGATCAAAGATCTTGGTTCTGCCATCGGCTGTTTTGGGGACGGTTCGCACATTGGATCGTGATTCTAATGCCTGCACTATTGCGAGAGCTGGAGATAATGTAGCCGTCACATTGAATGGTGTAGGTGCAAGTCATGTAGTGTCAGGAGGAGTATTATGCCACCCTGATTTTCCTGTTGCAATTGCAAGTCATTTGGAGTTGAAGGTGATTGTGTTGGAAGGAGCAAATCCCATATTGGTAGGATCGCAGTTGGAGTTTCACATGCGCCACTCCAAGGAGCTTGCTGAAGTTTCAAAATTATCATCAGTAGTTGATCCAAAAGCACCGTTGGCGCAAAGATCTGTCCTTCGCATTCTCCTTGCAAAGCAGACTGCGTTAGTTGAGGTAATTTTGCAAAGGCGAGTCTGTGTGGCAGAATCCTCTAAAGCTCTTGGAAGGGTGTCTCTAAGAGCGTTAGGAAGGACGATTGCTGTTGGTCTTGTTACCCGAATAATCGGATAG 1350 0.4444 MRTDEQKIRGRRGRGRLLSVLSAPMSIYRLRNETQTLDKTLTHRIQFPENCQRLSFNLKTAKSKVFRGKRSSPYAWILDQTSEERERGKSMTVAVAFFQSTKYNIVLLDSPGLGDFVPNMISGTAQSDAAILVIDASVGAYEVGMDNSKGQTWEHALLIRSFGIDQLIVAITKMDAVGYSKDRFEFIRQQLGVFLRTSRFKDSSGSWIPLSVTENQNLVSSPSDVRFKCWYKGRYLLDAIDSLQPPTREFSKPLLMPICDVIKSPTRGQVSACGKLEAGALRIGSKILVLPSAVLGTVRTLDRDSNACTIARAGDNVAVTLNGVGASHVVSGGVLCHPDFPVAIASHLELKVIVLEGANPILVGSQLEFHMRHSKELAEVSKLSSVVDPKAPLAQRSVLRILLAKQTALVEVILQRRVCVAESSKALGRVSLRALGRTIAVGLVTRIIG 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1826 449 PANTHER TRANSLATION FACTOR 63 447 - -
Prci11g1826 449 FunFam Translation elongation factor EF-1 250 340 - -
Prci11g1826 449 Pfam Elongation factor Tu GTP binding domain 74 239 IPR000795 GO:0003924|GO:0005525
Prci11g1826 449 Gene3D - 39 247 IPR027417 -
Prci11g1826 449 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 347 448 IPR009001 -
Prci11g1826 449 PRINTS GTP-binding elongation factor signature 86 94 IPR000795 GO:0003924|GO:0005525
Prci11g1826 449 PRINTS GTP-binding elongation factor signature 167 176 IPR000795 GO:0003924|GO:0005525
Prci11g1826 449 PRINTS GTP-binding elongation factor signature 122 133 IPR000795 GO:0003924|GO:0005525
Prci11g1826 449 PRINTS GTP-binding elongation factor signature 106 116 IPR000795 GO:0003924|GO:0005525
Prci11g1826 449 Gene3D Translation factors 344 448 - -
Prci11g1826 449 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 254 IPR000795 GO:0003924|GO:0005525
Prci11g1826 449 SUPERFAMILY Translation proteins 251 371 IPR009000 -
Prci11g1826 449 Pfam Elongation factor Tu C-terminal domain 346 447 IPR004160 -
Prci11g1826 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 268 IPR027417 -
Prci11g1826 449 Gene3D Translation factors 251 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1826 Prci-Chr11 15348669 15354204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1826 59 448 Eukaryotic Initiation Factors Gene Family AT5G10630 62.500 3.48e-179 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1826 K14416 - gmx:100798594 540.806