Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1779 ATGACAATGGAATTTTATGCACACACTCCGCTTGACGAGAATGAAGCGAGTCAGCCGCTGGTAGATGAGAATGAAACACGTCAGGCTCCACTAGACAAGAATGCTCATGATGACATTGTTAGAGTGTTGAACACCGCACTCGAGTTCATAAGAAAAGTGGGTCCAGCTCTGCTTGATGAGAATGAAGAGGGTCCGACTCCCCTAGACGAGAGTGAAACAAGTCAGGCTCTGCTATATGAAAATGAAGCAGGTGAGGCTCCACTTGACAAGAATGAAGCAAATCAAGCTCCACTATGTGAGAATGAAGTGGGTCAAGCTCGAGTTCCTCCCATACATCCAGAGAATTGGCCTTCCAACTGGAATTCAATGAATCAGACTTCATTGAACTTGGAGCCACCAAACAATATTGGCACCAAGAAAAGAAAATGGGCTTTGGCTGAACACATGTTCTCTAATAGGCAACAATTGGTGAATCAATCTCCATTCAACTCAAAGGCACCAACAACTATCCATACCCAAATCAACAAGGGAACCCGATGGACTGAAGAAGAACACCTGTTATTTGTGGACGGATTGCAAAGATATAGGAAGGGAGATTGGAAGAACATTTCCAAAATGTTGTGCGGACCAGGACGCCAACTCAGATTGCCAGTCATGCTCAGAAATACTTTAATCGCCAAGCTAAGAAAGGGAACAACAACAAGGATTATCCTACTACGAAAGGGAACAAAAAGAGAGAAAGAAAAAGCATCCATGATATCACCATTCATGATGTTTATGTTGAAGCTCAACAACAAAATCAAATGA 807 0.4287 MTMEFYAHTPLDENEASQPLVDENETRQAPLDKNAHDDIVRVLNTALEFIRKVGPALLDENEEGPTPLDESETSQALLYENEAGEAPLDKNEANQAPLCENEVGQARVPPIHPENWPSNWNSMNQTSLNLEPPNNIGTKKRKWALAEHMFSNRQQLVNQSPFNSKAPTTIHTQINKGTRWTEEEHLLFVDGLQRYRKGDWKNISKMLCGPGRQLRLPVMLRNTLIAKLRKGTTTRIILLRKGTKREKEKASMISPFMMFMLKLNNKIK 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1779 268 MobiDBLite consensus disorder prediction 1 21 - -
Prci11g1779 268 Gene3D - 179 223 - -
Prci11g1779 268 Pfam Myb-like DNA-binding domain 179 208 IPR001005 -
Prci11g1779 268 SUPERFAMILY Homeodomain-like 174 212 IPR009057 -
Prci11g1779 268 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 88 206 IPR043363 -
Prci11g1779 268 CDD SANT 179 212 IPR001005 -
Prci11g1779 268 ProSiteProfiles Myb-like domain profile. 179 212 IPR001005 -
Prci11g1779 268 SMART sant 176 230 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1779 Prci-Chr11 14954597 14956709 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci11g1779 Myb_DNA-binding 4.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1779 - - pcin:129285062 154.836