Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1764 ATGGCAACAACCCATTTCTTCCCCCAAGATATCATCACCGACATTCTCAAACGCCTCCTTGTGAAATCCCTAATCCGGTTTCAATGTGTCTGCAAGCATTGGAGACATCTCCTCAAAACCCCATCTTTCGTTGCTGAAAATCTCCGCCACTCCACTCATCAAAACTCTGTACTCCTTTTCCAAGGTTATCGTCTGTTTGATCCTTCGGGTTGGTGTTTTCTGGATCATGAGATGCAAGTTCAAAGCGCGCCTGAAATCGGTTCCTTGTTGGGTGTTAGGATTGTCGGTGCTATTAATGGCTTGCTCTGTTTCCGACCCGATAATGCATCAATTTTCTTATGGAATCCAGCTATTAGACAGTTCCATTGTTACAGGATAGCGAGAATTCATGTTTCCGTGAATAGCAGAGTTATTAGTTCGGAAGAATGCTTGTTAGATACTAATCTTGTCAATGAAGTGCACGTATATTCATTAAGCACAGGATCATGGAAGGGAATAGAATTTGGGAACTTAAATGGTGTATCCCTTATGTCTAACGGTTTGCATGCTATTGGATCCATCTTTTGGTTTGGGTTTATGCTAAACGTGGGGGAGGAGGATGAAAATGATGGTCATTTGGTAGTTTCATTTGACATTGCAACAGAAGTGTTTACTTTGATACCATTACCTACTTCAGCTCCTAAATCGTATCGCAATAGGCTTTCCGTGCACGAGAATAAACTTGCTATGCTTTCTCACACTCCTGTTGGAAACTCTGAATCTTCTGTGATTGATTTGTGGGTGATGGAGGAGGGAACAGGTGTATCTGGGGAAAGATGGAATTGGACTAAGAAATATAGTAGCCGCCCCTACCCGTTCTTGTTAAATCCAGGGTCCATTTGGAGGAATGAAATCGTCTGCATTTTTTTATGGATTGGAACTGAACGTGAAAGGAATAGAAGTAAAGGAAAAGTTGTTCTGTTCAATATCACCGCTAATAAAATTAAGATGCTTGCTACTCCGAAATATGGTGATGGCGATGGTTTGTTTTTCAATTATGTGGAAAGTCTTGTACCAGTTGGCAACGACCACATTGAAGAGTTTGATCCTAGATCTTAA 1098 0.4126 MATTHFFPQDIITDILKRLLVKSLIRFQCVCKHWRHLLKTPSFVAENLRHSTHQNSVLLFQGYRLFDPSGWCFLDHEMQVQSAPEIGSLLGVRIVGAINGLLCFRPDNASIFLWNPAIRQFHCYRIARIHVSVNSRVISSEECLLDTNLVNEVHVYSLSTGSWKGIEFGNLNGVSLMSNGLHAIGSIFWFGFMLNVGEEDENDGHLVVSFDIATEVFTLIPLPTSAPKSYRNRLSVHENKLAMLSHTPVGNSESSVIDLWVMEEGTGVSGERWNWTKKYSSRPYPFLLNPGSIWRNEIVCIFLWIGTERERNRSKGKVVLFNITANKIKMLATPKYGDGDGLFFNYVESLVPVGNDHIEEFDPRS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1764 365 NCBIfam F-box protein interaction domain 97 301 IPR017451 -
Prci11g1764 365 SUPERFAMILY Galactose oxidase, central domain 104 336 IPR011043 -
Prci11g1764 365 ProSiteProfiles F-box domain profile. 1 48 IPR001810 GO:0005515
Prci11g1764 365 CDD F-box_AtFBW1-like 6 43 - -
Prci11g1764 365 Gene3D - 5 45 - -
Prci11g1764 365 PANTHER BNACNNG10540D PROTEIN 7 346 - -
Prci11g1764 365 Pfam F-box domain 8 43 IPR001810 GO:0005515
Prci11g1764 365 SMART fbox_2 7 47 IPR001810 GO:0005515
Prci11g1764 365 Pfam F-box associated domain 200 265 IPR013187 -
Prci11g1764 365 SUPERFAMILY F-box domain 7 122 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1764 Prci-Chr11 14894197 14895362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1764 151 332 Carbohydrate Esterase AT1G25141 25.134 2.30e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1764 - - pcin:129301451 347.821