Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1763 ATGCCTTTGTGGGTCGTGAAGCCTTCCCTCACAGAAATTTGTTCTTCCCCGTCGAGCACTATGAAGAAAAAGGGTGTGGATGGCGACGCACCATCTCTTCCCGAAGACATCATCAGAAACATTCTGAAACGACTTCCTGTAAAATCCCTAATGCGATTTCAATGTGTCTGCAAGCATTGGAGAAATCTCTTCAAGAGCCCATCTTTCATCGTAGACCACCTCCACCACTCCACTCTTCAAAACCCTTATCTCCTTTCCCAGCTACACGGCTGGGATGCTCCTTCAAACTTATATTTGCTTGATTCCGATATGCAAGTCCGGGAATTTCAGCACCCTCCTTTGCTCGATTATGTGAAGCGCGGTAAGATCGTTGATTCCAGCAATGGCTTGCTCTCTGTTGAAATCAATAAGTATTATGTATCTCCTCATTTCTTTTTAGTGTGGAATCCAGCGATTAGAGAGATCAGACTGTTACCCGAAGCTAATTTTCGAGAGGATTATTGTTTTTATTTTATAGGATTTGGGTTCAGTCCAGTTATTAATGACTACAAGATAGTGGTAACTTATGTTTTTGAGGATTATATTGAGCTTTCTGCTGTGAAAGTGTATTCTTTAAACTCAGGTATATGGAAGGATGTAAAAGTTACGCTTGATGGTAGCGTACGTCTTAGTTCTCAAGGTGTCACTGTTAATGGTGTTATGTTTTGGTTTGTGTCAAACTTGGTTGGGCTGGATACATATGATGATGATGAGAAACGGATTGCTTCATTTGACCTAGCAACGGAAGTGTTTACAGTGATACCAGTACCTGAGCAACGCTCTACTTCATGGCTTACTGTGTATGAGGAAAAACTTGCTATGGTTTCTCATTCTGTGATTGGAAACACAGAACATTGTGTTATTGATCTGTGGGTAATGGAGGAAGGTATAGGTGCATCTGGGGAGAGATGGAGTTGGACTAAGAAATATACTAGCAGCCCTTATCCACGCTTGTTATATCCCGTGACCATTTGGAGGAATGAAATTGTCTGCAAGGTTTCAAGACCCAGAGGCAATACTGAAGATGGGGTTGAAGTAGTGGAGAATGATGAACCAACTACTGTTCTCTTCAATCTCACTACTAAAAAATGTAAGGTGTTTGCTATTAGCAAATTTGACTATCACCATCTTGTTATCGATTATGCCGAAAGCCTAGTTCCTGTTGGAGGAATGAAATCACTGGCAAATTTTCTGTAG 1236 0.4126 MPLWVVKPSLTEICSSPSSTMKKKGVDGDAPSLPEDIIRNILKRLPVKSLMRFQCVCKHWRNLFKSPSFIVDHLHHSTLQNPYLLSQLHGWDAPSNLYLLDSDMQVREFQHPPLLDYVKRGKIVDSSNGLLSVEINKYYVSPHFFLVWNPAIREIRLLPEANFREDYCFYFIGFGFSPVINDYKIVVTYVFEDYIELSAVKVYSLNSGIWKDVKVTLDGSVRLSSQGVTVNGVMFWFVSNLVGLDTYDDDEKRIASFDLATEVFTVIPVPEQRSTSWLTVYEEKLAMVSHSVIGNTEHCVIDLWVMEEGIGASGERWSWTKKYTSSPYPRLLYPVTIWRNEIVCKVSRPRGNTEDGVEVVENDEPTTVLFNLTTKKCKVFAISKFDYHHLVIDYAESLVPVGGMKSLANFL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1763 411 CDD F-box_AtFBW1-like 31 69 - -
Prci11g1763 411 NCBIfam F-box protein interaction domain 128 347 IPR017451 -
Prci11g1763 411 SUPERFAMILY F-box domain 31 91 IPR036047 GO:0005515
Prci11g1763 411 ProSiteProfiles F-box domain profile. 27 74 IPR001810 GO:0005515
Prci11g1763 411 SMART fbox_2 33 73 IPR001810 GO:0005515
Prci11g1763 411 PANTHER BNACNNG10540D PROTEIN 15 378 - -
Prci11g1763 411 Pfam F-box associated 227 326 IPR006527 -
Prci11g1763 411 Gene3D - 27 71 - -
Prci11g1763 411 Pfam F-box domain 32 69 IPR001810 GO:0005515
Prci11g1763 411 SUPERFAMILY Galactose oxidase, central domain 145 375 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1763 Prci-Chr11 14881568 14882803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1763 201 293 Carbohydrate Esterase AT1G25141 29.703 2.39e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1763 - - pcin:129286166 847.425