Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1706 ATGGAAAATGAGTCTCTGCTCGCGTATATCAGTCCCAGAAGGCGGCATCCACCTTCGCATCTCGCTCCACTGGCGGAGAACGACGAGGTGGTCCTGCCTCTGAACCCATCGGAGATTAAGGACCGACTTATCTTTGGCCCTTCGACTCCTAGAGATTCCGCTTCCTTAATTGAAGCGTTCACCCTCTCGCTTAATTCCCCGAGACAACATTCTTCTTCTGCACATGACCTTTTGGCTGGTTTAGTCGATTCGCAATTTCACCTGCCTCGACAATCATTGTCCAGACCTGCTTTTCATCGCTGTAAAACGGCACCGGCTATGGTTGTGGTCGGCGAATTCAACCACGATCCTACTGAACCTAAACCCCAATGCAGTTCGAATTCAATTGTTTCCCAAGCGGTTATTCTTCTTGTTATTTATTTATCGTTGGGGGTGCTTATTTATTCTCTCAATCATCATAATTTTACTGGAATTCAGACTAGTCCTGTGGTGGATGCATTGTATTATTGTGTAGTGACAATGTGCACAATAGGGTACGGTGATATTACTCCCACGAATACAGCGACGAAGGTTTTCTCTATCCTGTTTGTGTTGGTGGGTTTTGGGTTTATTGACATCTTGTTGAGTGCGATGGTGACTCATGTTCTTGATTTGCAAGAGAGTCACTTGCTGAGGACAATACTGAAGAGTAGGAGTGAGAATGACAGGAGATCATATATAATTGATGTCAAGAAAGGGAGAATGCGGATTAGGATGAAGGTGGGCTTGGCAATGTTGGTTGTTCTGCTTTGCATTGGAGTTGGTGTCTGTGTAATGCATTATGTGGAGATGCTTGGTTGGATGGATTCTTTCTATCTTTCTGTGATGTCAGTTACAACGGTAGGCTATGGTGACAAGGCATTCCAGTCTCTTTCTGGTCGTTTCTTCGCTGCAATTTGGTTGCTTGTATCGACTCTTGCAGTTGCTCGGGCTTTTCTTTATTTAGCTGAGGCAAGAGTGGACAAGAGGAATAGAAGAATGGCAAAGTGGATTCTTGGTCAGGATTTGACTGTTTCTGAGTTTCTTGCTGCAGACTTAGACCATAATGGCTCTGTGAGTAAATCAGAATTTGTTGTATACAAGCTCAAGGAGATGGAAAAAGTATCAGAGAAAGACATCATGCTGATCAGCGATCAGTTTGACCGGCTAGATTTCAGGAAATTAGGGAAAATAACTCTTACTGATCTCATAGGGAATCATCATTGA 1245 0.4386 MENESLLAYISPRRRHPPSHLAPLAENDEVVLPLNPSEIKDRLIFGPSTPRDSASLIEAFTLSLNSPRQHSSSAHDLLAGLVDSQFHLPRQSLSRPAFHRCKTAPAMVVVGEFNHDPTEPKPQCSSNSIVSQAVILLVIYLSLGVLIYSLNHHNFTGIQTSPVVDALYYCVVTMCTIGYGDITPTNTATKVFSILFVLVGFGFIDILLSAMVTHVLDLQESHLLRTILKSRSENDRRSYIIDVKKGRMRIRMKVGLAMLVVLLCIGVGVCVMHYVEMLGWMDSFYLSVMSVTTVGYGDKAFQSLSGRFFAAIWLLVSTLAVARAFLYLAEARVDKRNRRMAKWILGQDLTVSEFLAADLDHNGSVSKSEFVVYKLKEMEKVSEKDIMLISDQFDRLDFRKLGKITLTDLIGNHH 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1706 414 SUPERFAMILY Voltage-gated potassium channels 242 351 - -
Prci11g1706 414 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 134 387 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci11g1706 414 PRINTS Two pore domain K+ channel signature 292 301 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci11g1706 414 PRINTS Two pore domain K+ channel signature 172 200 IPR003280 GO:0005267|GO:0016020|GO:0071805
Prci11g1706 414 SUPERFAMILY Voltage-gated potassium channels 127 214 - -
Prci11g1706 414 FunFam Two-pore potassium channel 3 237 351 - -
Prci11g1706 414 Gene3D - 224 350 - -
Prci11g1706 414 Gene3D - 127 223 - -
Prci11g1706 414 Pfam Ion channel 135 213 IPR013099 -
Prci11g1706 414 Pfam Ion channel 258 329 IPR013099 -
Prci11g1706 414 ProSitePatterns EF-hand calcium-binding domain. 358 370 IPR018247 -
Prci11g1706 414 SUPERFAMILY EF-hand 345 409 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1706 Prci-Chr11 14375628 14379242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1706 1 410 Ion Channels AT4G18160 58.140 3.05e-167 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1706 K05389 - qsa:O6P43_012911 538.88