Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1705 ATGTCTGATGAGCACAAGGAACTCTACGACCAAGGCCGATCAACCATGTACTCATCGTCTTATGATTCGCAAGCTTTTGATCCTTCTTACATGAGCTTCACTGAGTGTCTGCAAATGGGAGCCATGGACTACAATTCATTTGCTTCTTCTTTTGCTCTGTCTCCTTCCACAATATTAACTTCGTCCGCTGATCAAACTCAAAAGCCATCGGAAGATGCAGACTGCGGCGGGGGTAGCCGAGGGGGCGAAACTCCGGTACTGACCCAGAACTCATCTCTCTCTTCCTCTTCTGATCATGGGGCTGAAGAAGATTCAGGCAAGAACACTGTGGACGATCATAGCCAAGCCAAAGGAGAAGAGGAAGCAGAAAGATCAAAGAAAGGGAAGAAAGGAAAGAAGAAAGGAGAGAAGAAGGAGAAGGAACCAAGGTTTGCTTTCATGACCAAGAGTGAGGTTGATCAGCTTGAAGATGGATACCGTTGGAGAAAATATGGCCAGAAAGCTGTCAAAAATAGCCCTTACCCAAGGAGTTACTACAGGTGCACGACACAGAAATGCACGGTGAAGAAACGAGTGGAAAGGTCGTTTGAGGATCCAACGACAGTGATAACAACGTACGAAGGTCAGCACAATCATCCTGTCCCCACTTCTTTGAGAGGCAATTATAATTCTGCTGCTGCTATGTTCACACCCTCGTTATCGTCTTCTTCCTCGTCCTCTTCCTCCGTTCTCTCTCCTCTGACCATGATGATCCCATCCATGGCTTCACCTCAAGACTTGCTTCTTCTCCACAGCACTCATGGAGGCTCCTCCAATATAAATAATAACAGTTCTCTTTATTACTCACACAACTATGCTAATCCTAATTCTATTCAGTATCATCATCATCAGCTTCCATCTTCACTTCCTGATCACCATGACGATGGCCTCCTCCAAGACCTGATCCCTTCTTCTATGTTCTTTAAACAAGAACCAAGACATGATTGA 987 0.4549 MSDEHKELYDQGRSTMYSSSYDSQAFDPSYMSFTECLQMGAMDYNSFASSFALSPSTILTSSADQTQKPSEDADCGGGSRGGETPVLTQNSSLSSSSDHGAEEDSGKNTVDDHSQAKGEEEAERSKKGKKGKKKGEKKEKEPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFEDPTTVITTYEGQHNHPVPTSLRGNYNSAAAMFTPSLSSSSSSSSSVLSPLTMMIPSMASPQDLLLLHSTHGGSSNINNNSSLYYSHNYANPNSIQYHHHQLPSSLPDHHDDGLLQDLIPSSMFFKQEPRHD 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1705 328 MobiDBLite consensus disorder prediction 83 99 - -
Prci11g1705 328 SMART WRKY_cls 155 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g1705 328 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 63 242 IPR044810 GO:0003700
Prci11g1705 328 SUPERFAMILY WRKY DNA-binding domain 147 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g1705 328 MobiDBLite consensus disorder prediction 100 127 - -
Prci11g1705 328 Gene3D WRKY domain 123 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci11g1705 328 ProSiteProfiles WRKY domain profile. 150 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci11g1705 328 FunFam WRKY transcription factor 57 141 215 - -
Prci11g1705 328 MobiDBLite consensus disorder prediction 60 145 - -
Prci11g1705 328 Pfam WRKY DNA -binding domain 156 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1705 Prci-Chr11 14356137 14358450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1705 1 325 WRKY Transcription Factor Family AT4G18170 44.886 2.15e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci11g1705 WRKY 1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1705 - - gmx:100787050 292.352