Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1695 ATGCGTTATTTTATGACGCTACTTACTGGAGATGTGCTGATCGGCTGCCTGCTGATAGCGAGAAATCTTGAGCTAGAATCCTGGATGAAAGAAGACAGAAGCAAAATAGATGATCTGTCTGTGATCGATGAGTTTATAGCAATGCCGGTTGCACCGGTTTTACAGTTAGGAGTGATGGTGATGGATGCCCGGAGACATCGCCGGTTTTCCTCACGAGAGTTTCTCTTGCTTTCCGAACTTGCAAATACTGCAAGTTCTGCTTTGGACTTCTTAGTTGCCAAATCCTCACCCCGTGTAAAAGCACGCTTTAAGTTTCATCTGCTTTTTACCACCGGCTTAATCTACGGCTTAATCTCTCGCTTAATCTCCGGCTTTCAGGGCAGTAAACTAGAACAAGATCATAACAGCCCCACCGAAGCGACTACCTTGAACACTGAGTTGGTTGATCAACAGAATTATGATAAAGCTGCTAATTCAATCTCTTCTACAACCAACTTTACTCAACGGGAAATAGAGGATCTTATTGGCCCTGTTTCTTCTTTGAACACTGAGTTGGTTGATCAACAGAATCATGGTAATGTTGCTCTTTCAATCTCTTCTACATCGAATTTTAGCCATTGGGAAATATCGGACCCCCCTATAGGGGATGGTGGATTTGCATTTGTTCGTGTTGCCTATAACAGAGTAACAGGAGACTTATGTGCAGTAAAGACACTTAAAGACCCTGACAATCTTGAGAAAGCAAGGTCTCTAATTAAGGAAATCAGGATTCTCAGCCAACTAGACCATCAAAACATAGTAAAGTATTATGGCAGTGGAAGTGTTGGAAACCAGATATACGTATTCATGGAATACGTGGAAACTGGTACACTGACGAATTACATTAGTGAACAAGGTCCTTTCCATGAACGTTTAGTTCGAGATACCTCTATACAAATTCTCTCTGCGTTGGCTTACTTACATGGCAAAAGACTAGTCCACAGGGATATCAAGCCCGATAACATACTCGTTGATTCCTACGGCTTTGTAAAGCTCATTGACTTTGGTTTGGCTAAGCGTGTAGATGAATCTGTGGGCAATCACTCGGGAACTTCACATTATGCATCTCCAGAGACTATTCTTAAGCAAGAATATAGCAGCTTGAGTGAAGCTTGTGCCGCTGATATATGGAGCCTCGGCTGTGTAATCATTGAAATGTTCACAGGGAAGCGTCCTTGGCCTGATCTTAATTGGTTCCAGGTGAACCGTGCAGTATGTTTGAACAACCGAGATCCTGAAATACCCGAAGATTTGTCGACGGAGGGCAAAGAGTTTCTCGAATTATGCTTCCAGAGAAATCCAGCCAAGCGGCTATCAGCTGCAGCATTACTGCAACATCCATTCGTGTCTCACTGA 1395 0.4315 MRYFMTLLTGDVLIGCLLIARNLELESWMKEDRSKIDDLSVIDEFIAMPVAPVLQLGVMVMDARRHRRFSSREFLLLSELANTASSALDFLVAKSSPRVKARFKFHLLFTTGLIYGLISRLISGFQGSKLEQDHNSPTEATTLNTELVDQQNYDKAANSISSTTNFTQREIEDLIGPVSSLNTELVDQQNHGNVALSISSTSNFSHWEISDPPIGDGGFAFVRVAYNRVTGDLCAVKTLKDPDNLEKARSLIKEIRILSQLDHQNIVKYYGSGSVGNQIYVFMEYVETGTLTNYISEQGPFHERLVRDTSIQILSALAYLHGKRLVHRDIKPDNILVDSYGFVKLIDFGLAKRVDESVGNHSGTSHYASPETILKQEYSSLSEACAADIWSLGCVIIEMFTGKRPWPDLNWFQVNRAVCLNNRDPEIPEDLSTEGKEFLELCFQRNPAKRLSAAALLQHPFVSH 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1695 464 ProSitePatterns Protein kinases ATP-binding region signature. 214 237 IPR017441 GO:0005524
Prci11g1695 464 SMART serkin_6 207 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1695 464 SUPERFAMILY Protein kinase-like (PK-like) 212 463 IPR011009 -
Prci11g1695 464 FunFam Maternal embryonic leucine zipper kinase 202 464 - -
Prci11g1695 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 325 337 IPR008271 GO:0004672|GO:0006468
Prci11g1695 464 Gene3D Transferase(Phosphotransferase) domain 1 201 464 - -
Prci11g1695 464 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 161 464 - -
Prci11g1695 464 Pfam Protein kinase domain 213 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g1695 464 CDD STKc_MAPKKK 214 462 - -
Prci11g1695 464 ProSiteProfiles Protein kinase domain profile. 208 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1695 Prci-Chr11 14274068 14278473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1695 214 464 MAP Kinase Kinase Kinase AT5G66850 46.743 9.77e-66 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci11g1695 Pkinase 2.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1695 - - pcin:129285400 906.36