Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1675 ATGATTGCAGCAATTGGTTCGGTGCTGTTGGCTGCAGCAATTGCTTCAGTGCTGTTGGCTGTAGCAATTTTTAGAGCTATTAGAACATCTCCTCGTTGTAAAGATGATGTTGATTCTACTTCCACGGCTTCTTCTTCTCATGTTGACACTGCTCCTCCTGCAACCAAGTACGATGTATTTCTTAGCTTTAGAGGGGAAGACGCTCGTGACAATTTCACTGGTCATCTTCGTGAAGCACTTCGCAAGGCAAACATTCGAACTTTTATGGATGACAAGCTCCCCAAAGGAGATAATATCTCACGAATTCTTTTGAGAACAATTGAGGAATCAGAGATCTCTCTGATTATATTCTCTGAAAATTATGCTTCTTCGACATGGTGTATGGATGAACTCATTCACATCATGGAATGCAACCATACATATGGAAGGATTGTCATTCCTATTTTCTATAATGTAGATCCAGCAGATATTCGTAAACAAAATGGGCGTTTTGGAAATGGATTTGCTAAGTTGGAGCGAAGTTTTAAACGCAACAAAGTGACAAAGTGGAGAAATGCTTTGGTCCAATCAACAAGTCTCTCTGGATGGGATTCCAAGAGTGTTAGGCCTGAATCTGAACTTGTTAAAAAGATTGTTGAAGACGTTTTGAGAAAATTGAATCGGAAGTCATTCGTGCATGTTAAAGGATTAGTTGGGATCGATCATCAGATGAGGAAAATTGTAGGGCTACTATGTGAGTTTCGCCTTGTGGGAATATGGGGCATGGGTGGTATTGGCAAGACCACTCTTGCCAAAGTTGTGTTTGCCTATTTGAAAGCACAATTTGAAGCTTTCTGTTTTGTTGAAAATGTTAGAGAAGAACTAGCAAGAATTGGATTGGATGAATTGCAGGGAAAATGCCTTAAAGAATTACTGAAAGATGAGGATATCAACATTTACAATATGAAATCAGATTTTGTGAAAAGTAGGCTCCAGCAGAAAAAAATTCTTCTGATCCTTGATGATGTGGACAAGTTCATCGCAGTTGAAGATTTGATCAGAGTATGTGAATCATTTGGGGAAGGAAGCAGAATTATGATCACATCAAGAGATGAGCAAGTGCTGAAGAATGCTTGTGCAACAACATATTCAGTTTCAAAATTGGATTCCAAGGATGCCCTTGATCTCTTTAGTTTGAAAGCTTTCAAGCAAAAGGATGAGCCATCTAAATGCCATATGAGGTTGGCAAATTGTGCAGTGGATTATTGTGCAGGAAATCCCTTAGCCCTCACAGTGTTGGGTTGTTATTTTCATGGTAGAGGAAAACAAGAATGGGAAAGTGCATTGGATAAACTAAATCAAACTCCTCACAATGACATTGTTAACGTGCTGAAATTGAGTTTTGATGGACTTGATGATGAGGAACAGAAAGAAGTGTTTCTTGATATAGCATTTTTAATCAAGAAACAACATGATTGTTCTTTGAACACAATAAGACAAATACATGGCTCTTCTGCAGATATTGACACAATTGTTCTTAGAGAGAGATCCCTCATTTCATTTCATGATAATTATGACTATATTGAGATGCATGATCTTGTGAGGGAAATGGGCCTTCAAATTGCAAGGCAACGGTCATTCTCTGATCCTAAACATCCTGTTCGACTTTGGAGGCCCAAGGACATTGATGATTATTTTTTTATGAGTAACAAGGGGGCGGAGGCAATTCGATGCTTGTCGGTGGATATGAGCAAGATAAAAGAAAGGACATGGAGGTCTATTAAATTTCAAAAGATGTATAATTTAATATGCCTGAATGTTTACAAGTCTGATTGGTGGAAGCCTTTAGAGTTTAATATTGGGAAAGATGTGGATTATCTTTCGGAGGAACTAAGGTTTCTTAATTGGGAAGGATGTCCTCTATCATATGTGCCATTAAAACCGTGTTCACAGAATCTTGTTAAATTTCGAATGCCTTATAGTCATATTCAACAACTTTGGGAAGGAGATATGCATTTTCCAAATTTAAAGGTGATCGATGTAATTGGCTCGAGATGTCTCACAACACTCCCAGATCTGTCTCAGGCCCCAAATCTTGAAGAGTTAGAAGCTATGGGTTGTGTAAGTTTGGATCAAATCCATTCTTCAACTTTCATGCCCAAGCTTAATGAATTAAGCCTATTTTGGAGTGGGGCAAAGCAGATAAAGATGGGTGGCACTATGAAAGGGAGAAGTGTGGGGATGGTTTTTATCTTCAATTATTTGGATCTTCACAAGTTGGCATTCAATAAAGTGAGGACGAAGGTGTTGGCATGTGACGAGGGTAGGATTATGTGGGGTTTTGAACATAAGCACGTGCACATGCCATTGGAGAATAGGGAAATGGCAGAGCTAAAAATAGGAGCACAGAGGTTGGCGTGTTTACTTCCATTTGTTAGGACAGTTAGTTGGTCAAAGGGTCCAACAGAGTTTGGGGATTTCAACCATCATTATACCTCTCACTTCTCTCTTGAGAAAAGGTTACGCGATGATGATTCAAAACTAGAAGTAACGGTAAGGAGACGTAGTGGAGAAAGCGAAGACGAGCGGTGGCCTGACTCATTAGTAAATGTGGAGGTAAGGAGACGTGGTGGAGAAAGCAAAGATGGGGGTCCATGGGGAAGAGAGGTGGGTAATGATGATAATCATAAGGGAGTTGAGCAAGAGGAAGTGTTGATGTCACAAACAAATGACACTGATGATGATATGCCACTGTTCACACTTCCCAATGCCATTACTCGTTGGTCACTATTGACACAATTGATGTTAAAGGAGAGTGAAGTTATTGGCAAAGCAGGAGACAGCAGCATTCCTCAAGTTTCAATTTTGAGATCACTTGCGCACTCTCACTCATAA 2874 0.397 MIAAIGSVLLAAAIASVLLAVAIFRAIRTSPRCKDDVDSTSTASSSHVDTAPPATKYDVFLSFRGEDARDNFTGHLREALRKANIRTFMDDKLPKGDNISRILLRTIEESEISLIIFSENYASSTWCMDELIHIMECNHTYGRIVIPIFYNVDPADIRKQNGRFGNGFAKLERSFKRNKVTKWRNALVQSTSLSGWDSKSVRPESELVKKIVEDVLRKLNRKSFVHVKGLVGIDHQMRKIVGLLCEFRLVGIWGMGGIGKTTLAKVVFAYLKAQFEAFCFVENVREELARIGLDELQGKCLKELLKDEDINIYNMKSDFVKSRLQQKKILLILDDVDKFIAVEDLIRVCESFGEGSRIMITSRDEQVLKNACATTYSVSKLDSKDALDLFSLKAFKQKDEPSKCHMRLANCAVDYCAGNPLALTVLGCYFHGRGKQEWESALDKLNQTPHNDIVNVLKLSFDGLDDEEQKEVFLDIAFLIKKQHDCSLNTIRQIHGSSADIDTIVLRERSLISFHDNYDYIEMHDLVREMGLQIARQRSFSDPKHPVRLWRPKDIDDYFFMSNKGAEAIRCLSVDMSKIKERTWRSIKFQKMYNLICLNVYKSDWWKPLEFNIGKDVDYLSEELRFLNWEGCPLSYVPLKPCSQNLVKFRMPYSHIQQLWEGDMHFPNLKVIDVIGSRCLTTLPDLSQAPNLEELEAMGCVSLDQIHSSTFMPKLNELSLFWSGAKQIKMGGTMKGRSVGMVFIFNYLDLHKLAFNKVRTKVLACDEGRIMWGFEHKHVHMPLENREMAELKIGAQRLACLLPFVRTVSWSKGPTEFGDFNHHYTSHFSLEKRLRDDDSKLEVTVRRRSGESEDERWPDSLVNVEVRRRGGESKDGGPWGREVGNDDNHKGVEQEEVLMSQTNDTDDDMPLFTLPNAITRWSLLTQLMLKESEVIGKAGDSSIPQVSILRSLAHSHS 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1675 957 SUPERFAMILY Toll/Interleukin receptor TIR domain 51 196 IPR035897 -
Prci11g1675 957 Pfam NB-ARC domain 237 451 IPR002182 GO:0043531
Prci11g1675 957 SMART till_3 56 193 IPR000157 GO:0007165
Prci11g1675 957 Pfam Leucine Rich Repeat 645 662 IPR011713 -
Prci11g1675 957 MobiDBLite consensus disorder prediction 868 888 - -
Prci11g1675 957 Pfam TIR domain 56 222 IPR000157 GO:0007165
Prci11g1675 957 PRINTS Disease resistance protein signature 416 430 - -
Prci11g1675 957 PRINTS Disease resistance protein signature 323 337 - -
Prci11g1675 957 PRINTS Disease resistance protein signature 664 680 - -
Prci11g1675 957 PRINTS Disease resistance protein signature 249 264 - -
Prci11g1675 957 ProSiteProfiles TIR domain profile. 55 219 IPR000157 GO:0007165
Prci11g1675 957 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 720 IPR044974 GO:0006952
Prci11g1675 957 SUPERFAMILY L domain-like 569 722 - -
Prci11g1675 957 Gene3D - 54 217 IPR035897 -
Prci11g1675 957 FunFam Disease resistance protein (TIR-NBS-LRR class) 53 221 - -
Prci11g1675 957 SUPERFAMILY "Winged helix" DNA-binding domain 452 556 IPR036390 -
Prci11g1675 957 Gene3D Ribonuclease Inhibitor 562 730 IPR032675 -
Prci11g1675 957 Gene3D - 380 465 IPR042197 -
Prci11g1675 957 Gene3D - 218 377 IPR027417 -
Prci11g1675 957 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 476 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1675 Prci-Chr11 14086569 14092405 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1675 57 700 WRKY Transcription Factor Family AT4G12020 30.226 3.55e-70 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1675 - - pcin:129301249 1625.14