Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1670 ATGCAGAATCACGAGTATATTTACCCTGAGAAGTTCGTTCTCCCTTTGGTGCATGAAGCAGTTGACACTTATTTGCATAGTCCTCTTGATGCAGTTTTACCTTCCGGTGCTAGGCAGATAACTCCCTTTGAAAGAGTTGAACTGCAACCCTCTGAGGTTTGCCCAAAGAATTTCATTATCTTTGATCAGACTGATAACCGGAGCAGAATTTTGTTCCATCCTGCAATGGCCAACAAATTTAGTGGCCCTGGCTTGAATGTTCATGCTACCTATAATCGAGACTCTGAGAAAAACGAAGTTAATCCTGTGGAAGGAGAGTTATCATCTCCTTTTGAAGAGGATTCTGAGGACATCAATGCATTGTTGAGCTTGGATGGAGAAGAGCTAGATGACCGTGATGAGGAAGAAGTCAGCACAGCAAGGACTAACGAAAATTATGAAAGTATTTGTGACACTTGCTCCAGTTATGGCTCAAAATCAAAGAAGAGATCATCATCATCTGTTCAAAAGTCGTCTAGGACCCATGGTCACTGCAGCAACCCTGAAATTAAGCACTGGGAAATGAAGAGAATGATCAGGGTACTGAGAGGGATTGTGCCTGGAGGCGGTGAGCAAATGGATTCTGTCACTGTTTTAGATGAAGCTGTGAGATACCTTAAGTCTCTCAAGGTGGAGGCTGAGAAACTTGGAGTTGCACCTTAA 702 0.4316 MQNHEYIYPEKFVLPLVHEAVDTYLHSPLDAVLPSGARQITPFERVELQPSEVCPKNFIIFDQTDNRSRILFHPAMANKFSGPGLNVHATYNRDSEKNEVNPVEGELSSPFEEDSEDINALLSLDGEELDDRDEEEVSTARTNENYESICDTCSSYGSKSKKRSSSSVQKSSRTHGHCSNPEIKHWEMKRMIRVLRGIVPGGGEQMDSVTVLDEAVRYLKSLKVEAEKLGVAP 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1670 233 MobiDBLite consensus disorder prediction 154 176 - -
Prci11g1670 233 PANTHER TRANSCRIPTION FACTOR BHLH145 32 232 IPR037546 -
Prci11g1670 233 MobiDBLite consensus disorder prediction 154 181 - -
Prci11g1670 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 222 IPR011598 GO:0046983
Prci11g1670 233 MobiDBLite consensus disorder prediction 92 115 - -
Prci11g1670 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 187 229 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1670 Prci-Chr11 14054976 14058098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1670 19 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 43.983 7.60e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1670 - - gmx:100791998 296.204