Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci11g1654 | ATGAACGATGAAGGCAAGAACAGGGATGTCGTCACCGATCCCCTAAACCAGCCTTACTATGGCACGTTTCAAGGCGTCGCCAACTACTATCCGAATCCGACTGCTCCACCTCCACCGCCGCAACCTCAGCCGGCGGTAGGATTTCCTCAGCCCATTCCGCCACCGGCAACGTACGGTGGTCATTATTACCATGGATATCAAACCGTTCCAGGTTATGTTGTTGCTGAAGGAAGGCCCATGAGGGAACACCGTCTTCCTTGTTGTGGACTTGGTCTGGGTTGGTTCTTGTTTATAACGGGATTCTTTCTTGGTGGCATTCCCTGGTATGTTGGAACTCTTGTGCTACTATGTGTACAGATGGATTACCGAGAAAAGCCTGGATTAGTTGCATGCACAGTTGCTTTTCATCAGTACCAGGTCGTTGGGAGGGCCCTGCCCACGGAATCAGATGAACATCCCAAGATTTACCGCATGAAACTCTGGGCCACGAACGAGGTTCGCGCCAAGTCGAAGTTCTGGTACTTTTTGAGGAAACTGAAGAAGGTTAAGAAGAGCAATGGTCAAGTGCTTGCTATCAATGAGATTTTTGAGAAGAACCCAACCAAGATCAAGAACTATGGCATCTGGTTGCGTTATCAGAGTAGGACTGGCTATCACAACATGTACAAAGAGTACCGCGACACCACTCTAAATGGTGCAGTGGAGCAGATGTACAATGAGATGGCTTCCCGTCACCGGGTCCGTTTTCCCTGCATTCAGATCATCAAGACGGCCACCATCCCAGCTAAGCTTTGCAAAAGGGAGAGCACCAAGCAATTCCACAACTCAAAAATCAAGTTCCCATTGGTTTACAGGAAAGTCAGGCCACCCACCAGGAAGCTTAAAACCACATACAAGGCCAAAAAGCCTAACTTGTTTATGTAA | 924 | 0.4859 | MNDEGKNRDVVTDPLNQPYYGTFQGVANYYPNPTAPPPPPQPQPAVGFPQPIPPPATYGGHYYHGYQTVPGYVVAEGRPMREHRLPCCGLGLGWFLFITGFFLGGIPWYVGTLVLLCVQMDYREKPGLVACTVAFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVYRKVRPPTRKLKTTYKAKKPNLFM | 307 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci11g1654 | 307 | MobiDBLite | consensus disorder prediction | 31 | 46 | - | - | |
Prci11g1654 | 307 | SUPERFAMILY | RplX-like | 200 | 275 | - | - | |
Prci11g1654 | 307 | PANTHER | 60S RIBOSOMAL PROTEIN L18A | 132 | 306 | IPR028877 | - | |
Prci11g1654 | 307 | FunFam | 60S ribosomal protein L18a | 201 | 276 | - | - | |
Prci11g1654 | 307 | Hamap | 50S ribosomal protein L18Ae [rpl18a]. | 135 | 198 | IPR028877 | - | |
Prci11g1654 | 307 | FunFam | 60S ribosomal protein L18a | 130 | 200 | - | - | |
Prci11g1654 | 307 | Gene3D | - | 128 | 200 | - | - | |
Prci11g1654 | 307 | Gene3D | - | 201 | 276 | - | - | |
Prci11g1654 | 307 | Pfam | Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A | 136 | 257 | IPR023573 | GO:0003735|GO:0005840|GO:0006412 | |
Prci11g1654 | 307 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci11g1654 | Prci-Chr11 | 13934403 | 13945391 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci11g1654 | 135 | 307 | Cytoplasmic Ribosomal Protein Gene Family | AT2G34480 | 93.064 | 9.31e-119 | 338 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci11g1654 | K02882 | K22683 | cave:132168791 | 489.189 |