Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1654 ATGAACGATGAAGGCAAGAACAGGGATGTCGTCACCGATCCCCTAAACCAGCCTTACTATGGCACGTTTCAAGGCGTCGCCAACTACTATCCGAATCCGACTGCTCCACCTCCACCGCCGCAACCTCAGCCGGCGGTAGGATTTCCTCAGCCCATTCCGCCACCGGCAACGTACGGTGGTCATTATTACCATGGATATCAAACCGTTCCAGGTTATGTTGTTGCTGAAGGAAGGCCCATGAGGGAACACCGTCTTCCTTGTTGTGGACTTGGTCTGGGTTGGTTCTTGTTTATAACGGGATTCTTTCTTGGTGGCATTCCCTGGTATGTTGGAACTCTTGTGCTACTATGTGTACAGATGGATTACCGAGAAAAGCCTGGATTAGTTGCATGCACAGTTGCTTTTCATCAGTACCAGGTCGTTGGGAGGGCCCTGCCCACGGAATCAGATGAACATCCCAAGATTTACCGCATGAAACTCTGGGCCACGAACGAGGTTCGCGCCAAGTCGAAGTTCTGGTACTTTTTGAGGAAACTGAAGAAGGTTAAGAAGAGCAATGGTCAAGTGCTTGCTATCAATGAGATTTTTGAGAAGAACCCAACCAAGATCAAGAACTATGGCATCTGGTTGCGTTATCAGAGTAGGACTGGCTATCACAACATGTACAAAGAGTACCGCGACACCACTCTAAATGGTGCAGTGGAGCAGATGTACAATGAGATGGCTTCCCGTCACCGGGTCCGTTTTCCCTGCATTCAGATCATCAAGACGGCCACCATCCCAGCTAAGCTTTGCAAAAGGGAGAGCACCAAGCAATTCCACAACTCAAAAATCAAGTTCCCATTGGTTTACAGGAAAGTCAGGCCACCCACCAGGAAGCTTAAAACCACATACAAGGCCAAAAAGCCTAACTTGTTTATGTAA 924 0.4859 MNDEGKNRDVVTDPLNQPYYGTFQGVANYYPNPTAPPPPPQPQPAVGFPQPIPPPATYGGHYYHGYQTVPGYVVAEGRPMREHRLPCCGLGLGWFLFITGFFLGGIPWYVGTLVLLCVQMDYREKPGLVACTVAFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYNEMASRHRVRFPCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVYRKVRPPTRKLKTTYKAKKPNLFM 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1654 307 MobiDBLite consensus disorder prediction 31 46 - -
Prci11g1654 307 SUPERFAMILY RplX-like 200 275 - -
Prci11g1654 307 PANTHER 60S RIBOSOMAL PROTEIN L18A 132 306 IPR028877 -
Prci11g1654 307 FunFam 60S ribosomal protein L18a 201 276 - -
Prci11g1654 307 Hamap 50S ribosomal protein L18Ae [rpl18a]. 135 198 IPR028877 -
Prci11g1654 307 FunFam 60S ribosomal protein L18a 130 200 - -
Prci11g1654 307 Gene3D - 128 200 - -
Prci11g1654 307 Gene3D - 201 276 - -
Prci11g1654 307 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 136 257 IPR023573 GO:0003735|GO:0005840|GO:0006412
Prci11g1654 307 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1654 Prci-Chr11 13934403 13945391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1654 135 307 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 93.064 9.31e-119 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1654 K02882 K22683 cave:132168791 489.189