Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1653 ATGTCAAGGAGAAAGGTTAGAGAGCCAAAGGAAGAAACTGTCACTCTTGGCCCAACTGTCAGAGATGGGGAACATGTTTTTGGCGTGGCCCATATCTATGCATCATTTAACGATACCTTCATTCACGTGACTGATTTGTCTGGAAGGGAAACCCTTGTTCGTATAACAGGTGGAATGAAGGTGAAGGCTGACAGGGATGAGTCTTCCCCTTACGCTGCTATGCTTGCAGCACAGGATGTATCTGCTAGATGCAAGGAGCTGGGTATAACTGCTCTTCATATCAAGCTCCGTGCCACTGGTGGAAACAAGACAAAGACCCCAGGACCTGGTGCTCAGTCTGCTCTCCGTGCCCTTGCTCGTTCAGGAATGAAAATTGGTCGAATAGAGGATGTGACTCCGATCCCATCTGACAGCACCAGGAGAAAGGGTGGTAGAAGGGGAAGAAGGCTTTAA 453 0.4879 MSRRKVREPKEETVTLGPTVRDGEHVFGVAHIYASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 150
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1653 150 Pfam Ribosomal protein S11 28 146 IPR001971 GO:0003735|GO:0005840|GO:0006412
Prci11g1653 150 ProSitePatterns Ribosomal protein S11 signature. 115 137 IPR018102 -
Prci11g1653 150 FunFam 40S ribosomal protein S14 1 150 - -
Prci11g1653 150 MobiDBLite consensus disorder prediction 130 150 - -
Prci11g1653 150 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 3 145 IPR001971 GO:0003735|GO:0005840|GO:0006412
Prci11g1653 150 Hamap 30S ribosomal protein S11 [rpsK]. 3 147 IPR001971 GO:0003735|GO:0005840|GO:0006412
Prci11g1653 150 SUPERFAMILY Translational machinery components 23 148 - -
Prci11g1653 150 Gene3D Ribosomal protein S11 1 150 IPR036967 GO:0003735|GO:0005840|GO:0006412
Prci11g1653 150 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 1 147 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci11g1653 Prci-Chr11 13931003 13933616 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1653 1 139 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 89.928 2.37e-92 262
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1653 K02955 - fve:101298237 263.077