Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g1640 ATGCAAACTCAGAATATGTCATTTTCCTGTGCAAAGAACTTCTTTCAGAGGTTCTGGTTAGATGAAATCAATATGGGAAGTTTTTCTCATAGCAACTTCCTGTCTAGTGATCTTCTGCCATCTCTTGGAGCTCAAATGGTGCAGGAAATCAGACTCCGAAGATACATAATCTCCCCTTTCGATCCGAGATATAGGGCTTGGGAGATGATACTGGTAGTTCTAGTCATTTACTCAGCCTGGATATGCCCCTTTGAGTTTGCCTTCCTGCCTTCAAAGCAAGATGCACTGTTCATTATTGACAACGTTGTTGATGGTTTCTTTGCCATCGACATCATGCTCACATTCTTTGTTGCATATTTAGATAGTCAGTCTCACCTTCTTGTTGATGATCACTGGAAAATTGCAATCAGGTACATATCTACCTGGTTTATTTTTGATGTCTGCTCAACAGCACCATTTCAGATCATCAGCCTTTTCTTCACAAACCATAGCAGTGAGCTTGGCGTTGACCTGCTTAACATGCTTCGGTTATGGCGTCTGAGACGAGTTAGCTCTCTGTTTGCAAGAATTGAGAAAGACATCCGCTTTAACTATTTCTGGACCAGGTGCATAAAACTCATTGCTGTAACAATGTTTGCCATACACTGTGCTGGATGCTCTTGCTATCTAATTGCAGAGAAGTATCCTGATTCCAAAAGGACCTGGATTGGTGCAACGCACCCAAATTTCAAAGAAGAAAGTCTTTGGGACAGATATGTGACTGCAATATACTGGTCCATTGTAACACTTACCACTACTGGCTATGGGGATTTACATGCTCAAAACCCTGGGGAGATGCTGTTTGATACTGTGTTCATGCTTTTCAATTTGGGATTAACATCATACATCATTGGAAACATGACAAACCTTGTGGTTCACTGGACCAGCCACACCAAAACTTTTAGAGATACGATTAGAGCAGCATCAGAGTTTGCATCAAGGAATCATCTGCCGCATCACCTACAAGATCAAATGTTGTCACATTTATGTCTGAGGTTTAAAACAGAAGGATTGAAGCAACAAGAAACATTAAATGGTCTGCCCAGGGCAATTCGTTCAAGCATTGCAAATCATCTCTTCTTTCCTGTTCTGAAGGAGGTCTACCTATTCCATGGAGTTTCATATGACTTCCTCTTCCAACTGGCCTCAGAAATGGAAGCTGAGTATTTTCCACCCAAGGAAGATGTGATACTGCAAAATGAGGTTCCTACAGATCTTTACGTGTTAGTTTCAGGTGCAGCGGATCTTGTTCGCCACATGGATGGGCATGATCAAGTTGTTGGGAAGGCAGTTTTAGGAGAAACATTTGGAGAGATTGGGATATTAACCTACAGGCCACAACCATTCTCTATTCGGACTGCAGAGCTTTCTCAAGTTTTACGACTCAAAAAAACTTCGTTAATGAAGGCTGTTCAAGCTTATCCAGAAGATTCAAAAATCATAATGGATAACCTTGTCATGAGATTAAAGGGACAAGAAGGCTTGGGTTTTGAGTATCCAAATGCAGAGCCTGGATTGGTCCTTCATGAAAAAGTAGATGGAGTAAAAGCAAGAGAAAGCGTCTCTCATGCACGCACAAACAGTTCATACCAGGATTCATTAGTCCAAGAACGAAGGTATAGAAACTTCACAGACTCAGAGCTTACATTGCATGAGGTGACAAGCGAATATGGAGAAAGGAATATTCATGCTGCTACAGTCAAAGGGCATCCAGAGATGGTTGACGTAGTGCTCGAAAGAGATGCAAACGCCAAGCCCCTGAATTTCGCAAGTCGGAAATCAAAAACTCAGGTAGAACAGCAAAATCAAAAGAGCACTTCTAACCTCTTCATGAATTGTGGAGATAGGGAGAGATCCGATGAATATAGAATAATAGACTTTGAGGAGCCGGATATGTTAAGCCATGTTAGGAACGACACAGCCAGAAACAGAAAACATGATGATCCCAGATCATTTAACTGCCCATTAGAGAGTGCATACAAAACTTCTTATTCGAGTAATCTTAATTGTCCAAGCGATAGAGAAGTAGCTAGATTCAACAAGAAGAGAGTCACAATTCACTTAATAGGCCAGTGCAGCGGCACTTCACGCGGACAGCATGGGAAGTTGATTATTCTGCCTGATTCAATAGAAGAGCTGCTCAAGATTGCTGAAGAAAAGTTTGCAGGATCAAAACCTACAAGAGTTATTAATACAGAGAAAGCAGAGATAGATGACATAAGAGTCATTCGAGATGGCGATCACCTCCTTTTCCTTTGCAGCAATAGTGAAAATTTGCAGTCACTATGTTAA 2331 0.4136 MQTQNMSFSCAKNFFQRFWLDEINMGSFSHSNFLSSDLLPSLGAQMVQEIRLRRYIISPFDPRYRAWEMILVVLVIYSAWICPFEFAFLPSKQDALFIIDNVVDGFFAIDIMLTFFVAYLDSQSHLLVDDHWKIAIRYISTWFIFDVCSTAPFQIISLFFTNHSSELGVDLLNMLRLWRLRRVSSLFARIEKDIRFNYFWTRCIKLIAVTMFAIHCAGCSCYLIAEKYPDSKRTWIGATHPNFKEESLWDRYVTAIYWSIVTLTTTGYGDLHAQNPGEMLFDTVFMLFNLGLTSYIIGNMTNLVVHWTSHTKTFRDTIRAASEFASRNHLPHHLQDQMLSHLCLRFKTEGLKQQETLNGLPRAIRSSIANHLFFPVLKEVYLFHGVSYDFLFQLASEMEAEYFPPKEDVILQNEVPTDLYVLVSGAADLVRHMDGHDQVVGKAVLGETFGEIGILTYRPQPFSIRTAELSQVLRLKKTSLMKAVQAYPEDSKIIMDNLVMRLKGQEGLGFEYPNAEPGLVLHEKVDGVKARESVSHARTNSSYQDSLVQERRYRNFTDSELTLHEVTSEYGERNIHAATVKGHPEMVDVVLERDANAKPLNFASRKSKTQVEQQNQKSTSNLFMNCGDRERSDEYRIIDFEEPDMLSHVRNDTARNRKHDDPRSFNCPLESAYKTSYSSNLNCPSDREVARFNKKRVTIHLIGQCSGTSRGQHGKLIILPDSIEELLKIAEEKFAGSKPTRVINTEKAEIDDIRVIRDGDHLLFLCSNSENLQSLC 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g1640 776 FunFam Potassium channel KAT2 370 506 - -
Prci11g1640 776 ProSiteProfiles cAMP/cGMP binding motif profile. 382 501 IPR000595 -
Prci11g1640 776 Pfam Cyclic nucleotide-binding domain 402 486 IPR000595 -
Prci11g1640 776 SUPERFAMILY Voltage-gated potassium channels 59 304 - -
Prci11g1640 776 ProSiteProfiles KHA domain profile. 696 776 IPR021789 -
Prci11g1640 776 CDD CAP_ED 382 495 IPR000595 -
Prci11g1640 776 PRINTS EAG/ELK/ERG potassium channel family signature 252 269 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci11g1640 776 PRINTS EAG/ELK/ERG potassium channel family signature 77 84 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci11g1640 776 PRINTS EAG/ELK/ERG potassium channel family signature 100 110 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci11g1640 776 PRINTS EAG/ELK/ERG potassium channel family signature 111 120 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci11g1640 776 PRINTS EAG/ELK/ERG potassium channel family signature 278 289 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci11g1640 776 PRINTS EAG/ELK/ERG potassium channel family signature 296 305 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci11g1640 776 Pfam Ion transport protein 65 311 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci11g1640 776 Gene3D Helix hairpin bin 306 372 - -
Prci11g1640 776 PANTHER POTASSIUM CHANNEL AKT1 30 507 IPR045319 GO:0005249|GO:0006813
Prci11g1640 776 SMART cnmp_10 382 499 IPR000595 -
Prci11g1640 776 Pfam KHA, dimerisation domain of potassium ion channel 695 764 IPR021789 -
Prci11g1640 776 SUPERFAMILY cAMP-binding domain-like 309 502 IPR018490 -
Prci11g1640 776 Gene3D - 65 305 - -
Prci11g1640 776 Gene3D Jelly Rolls 375 507 IPR014710 -
Prci11g1640 776 FunFam Potassium channel KAT3 66 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g1640 Prci-Chr11 13829149 13833519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g1640 6 764 Ion Channels AT5G46240 55.863 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g1640 K21867 - gmx:100783528 1026.16